EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM046-02387

Organism

Mus musculus

Tissue/cell

ESC_Bruce4

Coordinate

chr4:141121110-141122300

Target genes

Number: 15
Name	Ensembl ID

Gm13056	ENSMUSG00000085395
Fam131c	ENSMUSG00000006218
Clcnkb	ENSMUSG00000006216
Zbtb17	ENSMUSG00000006215
Spen	ENSMUSG00000040761
B330016D10Rik	ENSMUSG00000048406
Fblim1	ENSMUSG00000006219
AI507597	ENSMUSG00000073731
Tmem82	ENSMUSG00000043085
Slc25a34	ENSMUSG00000040740
Plekhm2	ENSMUSG00000028917
Rsc1a1	ENSMUSG00000040715
Ddi2	ENSMUSG00000078515
Dnajc16	ENSMUSG00000040697
Casp9	ENSMUSG00000028914

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Arid5a	MA0602.1	chr4:141121668-141121682	CTAATATTTAAAAA	+	6.13
IRF1	MA0050.2	chr4:141121678-141121699	AAAAAGAAAAGGAAAGGAAAA	-	6.31

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_07126	chr4:141120154-141122707	Heart
mSE_10398	chr4:141121367-141122851	Embryonic_stem_cells

Enhancer Sequence

GGGTCGGGGG TGGGGGACGG ACACGGGACA GGACTTTGGT TATTCGAGCT CCTGGGGATT 60
CAACACCCTT TCCGGCCTCT GAGGCCCCCT GTGCTCTGGT GCATACACTT CAAGTACATA 120
ATTAAAAAAG AAAGAAAGAA AGACTTTAAA AAAAGAAACC TAGTTTTCAA TGTGGGTTTC 180
TAAGAAGATG CTAAATACAG AACTATGGAA TGTAAGCTAT TTCCCCTCCA TACTTCCCCA 240
GTCCTCAGAG CCCAAGAATG AGCTCCGACT TGAGAGAACA GAAAGCTTTT TGGTTTAAAA 300
TGCCGGGTGG GGCGTTGTTT CCCGCTCCGG CTGGGGCTGG AATCCACCCA TTGTGATTCA 360
GCTCTCCCCG CTGTTCCTTG GAACTAGTGA AGGACAAAGC CACAGCTTTC CTCACCTCTC 420
TTAGAAAAGG CCACAAAAGA CAGATTTGGG AGCTCTGTGG GTGGCTAAGC ATTTGTGGGT 480
TGATCAGAGG TTGGAAGTTA TCTCATCTCC CGGCCTCCTA GTGAGTCTGA GGCCCACCTG 540
GGCCACAGGA GACCCTGTCT AATATTTAAA AAAGAAAAGG AAAGGAAAAA AAAAAAAGGA 600
GGAAAGCAAA GTGAAAACAA AGTCTAGCAG TTGGGCAGAG GTGACACATG CCTTTAATCC 660
CAGCACTCGG GAAGCAGAGG CAGGCAGATT TCTGAGTTTG AAGCCAGCCT GGTCTACAGT 720
GAGTTCCAGG ATAGCCAGGG CTACACAGAG AAACCCTGTC TCGAAACAAA ACAAAGTAAA 780
ACAAAACAAG TCCAGCAGTA CTTATGGTCC TAAGCAGCGG CTACCAACCT GTGGGTTGTG 840
ACCCCTTTCA TAAGGTAAGG GAGTGCTGAA AGACCCTTTT GCCTAAGACA ATACCGTCGC 900
AAAACACAGA AACAGTACAA TTGAAAGCGG TAGAAAAATA ACAGTTATGA AGTAACAGCG 960
AAAATAATTT TCTAGTTGGG GGTCACCACA ACGGAGGAGC TGTCTTAAAG AGTTGCACGA 1020
AGTGTTAGGA ACGTTGGGAA CCACTGGCCT AAGGTGATAA GCCATCCACT TTTAGAACCG 1080
GTTGATCCAA TGCAGTTCAC ACTTTTGGGA AAAGGCCGAA TTTGGCTCTG GGGGAAGTAT 1140
CAATCTGAAC AAGTAGGTTT GGTGATGAGT CCTCAGACTG CCAGGAGCCC 1190