EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM046-02275

Organism

Mus musculus

Tissue/cell

ESC_Bruce4

Coordinate

chr4:118813670-118814350

Target genes

Number: 11
Name	Ensembl ID

Gm12864	ENSMUSG00000082143
Gm12866	ENSMUSG00000066060
Slc2a1	ENSMUSG00000028645
Mir1957	ENSMUSG00000088552
Gm12867	ENSMUSG00000086683
Gm12868	ENSMUSG00000085505
Ccdc23	ENSMUSG00000028643
Lepre1	ENSMUSG00000028641
Ybx1	ENSMUSG00000028639
Ccdc30	ENSMUSG00000028637
Ppcs	ENSMUSG00000028636

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOSL2	MA0478.1	chr4:118814126-118814137	CTGAGTCATCC	-	6.32
Foxd3	MA0041.1	chr4:118814333-118814345	AAACAAACAAAC	-	6.32
JUNB	MA0490.1	chr4:118814126-118814137	CTGAGTCATCC	-	6.14

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_10120	chr4:118813268-118814875	Embryonic_stem_cells
mSE_11205	chr4:118813220-118815611	Placenta

Enhancer Sequence

AAACTGTGTG TAGCTAGGAC AAAGTTGCCT ACGGCATAGT GGGAGGTTCG AGAAAGAGCA 60
GCTGGAACCT CAAAAGGGGC GGGGGCAGGG GAGGTCTAAA AACTTGTCCC ACCTGGTTCC 120
TCCATGAGGG AAGGTGAACA GGTCCTGAGC CCAGGGCTGC TTGTGAGTCA TTCCAGCTGC 180
TCTGGATGAC ACTGTGATGG CTAAGCCAGG TGCCACAGTG CGGTACGTGC CTGTAAGCCT 240
GGGTGATAAT GGCTGCTCTC CTCAGAGGAC AGCATTCCAC ATGCACAATG TGATGTGGTC 300
ACAGGACTCC AAATTAACTG TCACTTTCTC TGTGAGGCGT CTGTTCACTC CTTCAACTGT 360
TAAGTAATCA GGCACGCTCC GCAGGCGCTC TCCTGTGCTG TGCACTGCCT TAGAAACAGA 420
GTCAGAAGCA GCTGACTTTA GACTGTCGCT ACTGGGCTGA GTCATCCCGG GAAAGTCTCT 480
ACGCTTCCGA TCTCCAGTGT CCTCATCTGT TGTCCTATTA GAGTGGAATA AATATGCCGG 540
TGGGGTGGAG CCTTTAATCC TAGCACCCTG GAGGCAGAGT CAAGTAGATC TCTGAGTTTG 600
AGGCCAGCTT GGTCTACAGA GTGAGTTCTG GGACAGCCAG GGCTATACAG ATCTTGTCTC 660
AAGAAACAAA CAAACAAAAA 680