EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM046-01570

Organism

Mus musculus

Tissue/cell

ESC_Bruce4

Coordinate

chr18:38533340-38533870

Target genes

Number: 10
Name	Ensembl ID

Pcdh1	ENSMUSG00000051375
0610009O20Rik	ENSMUSG00000024442
1700086O06Rik	ENSMUSG00000086988
Rnf14	ENSMUSG00000060450
U6	ENSMUSG00000089296
Gnpda1	ENSMUSG00000052102
Ndfip1	ENSMUSG00000024425
AC134576.1	ENSMUSG00000092786
Spry4	ENSMUSG00000024427
Arhgap26	ENSMUSG00000036452

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF13	MA0657.1	chr18:38533783-38533801	CTGCCACGCCCACTGCTG	+	6.07
KLF14	MA0740.1	chr18:38533784-38533798	TGCCACGCCCACTG	+	6.28
SP3	MA0746.2	chr18:38533784-38533797	TGCCACGCCCACT	+	6.71
SP8	MA0747.1	chr18:38533785-38533797	GCCACGCCCACT	+	7.22

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_10076

chr18:38530625-38534009

Embryonic_stem_cells

Enhancer Sequence

TACTGTTTTA TTTTATTTGG AGACAGGGTC TCATTATGTT CCCTGAGTTG GTTCCACCTT 60
CTTAAGTCAA GCAATCTTCC TGATTCAGCT TCTTGAGTCG CTAGGGTTAC AGGTGCATAC 120
CACTGTACCT AGGGGTTACA GGTGCACACC ACTGTACCTA GGGGTTACAG GTGCATACCA 180
CTGTACCTAG GGGTCAGCCA GATTTGGGGA TTCTGAATGT CATAACTAAA TTGTCAATTT 240
GATGAGACAC CCAGAAGGCA GCCCTCTAGT CATGCTTATG TGACACCACC TTGATTAGGT 300
TAATTGAGGT GGGAAAACTT GTCCACTGTG AGTGGCACCA TTCCCTAAAA TCCTGGACTG 360
AATAAAAAGG AGGATGGCTG TAGTCTCCCC TCCCCCAGCC TGAAACCTGC TTGCTCAGGG 420
GTGGAGCTTC CTGCTCATTC GTTCTGCCAC GCCCACTGCT GGAGATTGGA GACGTACTAT 480
TGAAAGGGCA AACCCTTCAC TGCCTCCCAC CCAAATAAAA ATTGGCCTTG 530