EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM046-00825

Organism

Mus musculus

Tissue/cell

ESC_Bruce4

Coordinate

chr12:111185360-111188640

Target genes

Number: 6
Name	Ensembl ID

Mir3070b	ENSMUSG00000093209
Rtl1	ENSMUSG00000085925
Rian	ENSMUSG00000091793
SNORD113	ENSMUSG00000064452
Mir882	ENSMUSG00000077881
Mir453	ENSMUSG00000077925

TF binding sites/motifs

Number: 11

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr12:111186085-111186097	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr12:111186089-111186101	AAACAAACAAAC	-	6.32
HNF4G	MA0484.1	chr12:111188079-111188094	TGACCTTTGACCTTC	-	6.4
NR2C2	MA0504.1	chr12:111188079-111188094	TGACCTTTGACCTTC	-	7.28
Nr2f6	MA0677.1	chr12:111188079-111188093	TGACCTTTGACCTT	-	8.12
RXRB	MA0855.1	chr12:111188079-111188093	TGACCTTTGACCTT	-	7.82
RXRG	MA0856.1	chr12:111188079-111188093	TGACCTTTGACCTT	-	7.82
Rxra	MA0512.2	chr12:111188079-111188093	TGACCTTTGACCTT	-	7.82
SP2	MA0516.2	chr12:111185366-111185383	CTCAGCCCCACCCACTC	+	6.64
TP53	MA0106.3	chr12:111187963-111187981	AACAAGCCCGGGCCTGTT	-	6.38
TP53	MA0106.3	chr12:111187963-111187981	AACAAGCCCGGGCCTGTT	+	6.73

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_10404	chr12:111184424-111186729	Embryonic_stem_cells
mSE_10404	chr12:111186777-111190252	Embryonic_stem_cells

Enhancer Sequence

TCTCTGCTCA GCCCCACCCA CTCTCTTCTG GCACTACCTT GCAGCGGCCA TTGCCTTAGA 60
ACCTCCACCT CCAGCTAGTG TGTCTTCCTG GGAAGCACTC TTGAGTCCTG TAAAAGGTAG 120
GCTAGGAGAC CTAACATCCA CTGAACCCCC TGGGGCACAG ACACCTACAG AGAACTCTTA 180
CAGGTTCTGC CCACTGTCTG TTCTTGTTTC AGAGATTCAC CACATGGGCC AGGAATCGAA 240
GAGCTCCAGG TCTATCTCAG CCACCAGAAA TCAGGATATC CCTGAAGCAA GCATACTTTA 300
TTAAAAAGAT ATATTTATTT TTATTTTATG CACGTTCATG TTACACTTGT ATGTGTATTG 360
CATGTGAGCC TGATGCCCGA CAAGGCCAGA AGAAGTCGTC AGAGCTCCTG GAATTGGAGT 420
TACAGGTGGT GGTGAGCCAC CATGTGCGTG ACAGGAATAA AGCACTGGGC TTCGGGAAGG 480
GCAGCCAGTG CTCTTAACCC CTGAGCCATC TCTCAGCCCC CAAACCTGGT TTTCATTTGG 540
GCATTTTGAC CCCAGCTCAC TAATGTCTGC CAAATCTTGC AGCTTTTCAG TTGCACAAGA 600
ACAACGTCTT ATAAAACCTT TGTACAGCTT TTCTAAAACT TTAAAAGAAA AAAACAGAAC 660
AAAAAACTCT GGCCTCCTCG TTCCCTTCAG GCACAAATCC TAAAGGATGC AAAAAAGCAA 720
GCCAAAAACA AACAAACAAA CAACCAAACA ACAAGAGAAC CCCATAACAA CAGCAACAGA 780
CTTCTTGGTT GAAAGTCAGG CCTTGGGTGG GGGGTGATCA ATTTCAGGTG AGGCCAGGAC 840
TGCCCCAGAA CCAGCTACAG GGATCTGGGC GTCAGAGGGG AAGCAGCTGA GACACATGGG 900
AAAACCTACG CTATGGGATG CTGGAGATTG CACGCAGCCT AAGTGACCAA GACAAGACCC 960
CAGAAAGTCC CCTCCTGCTC ATTTGTCTGT CAGCAAGTCT TGATTGTGAA TCACAAATTT 1020
TGTCCATCCT TCACTCTGGG ATGGAAGGAC TTGGTGATTT TTAGCCAGGC AGGCGGTGGA 1080
CAGTTCCTTT CCTTAGCCCT CTGCACATTG GGTGGCTTTC CATCTGCCCC CTGTCACCCC 1140
ACACCTCAGG ATCTTTATTT GTAGACTTGT TCACAGAGCA GTTGTGCTGA GTTAAAATTC 1200
AGTTTTCAGA AAGGCTGCCT AGACGCCCGA TGGGAGTGTC ATTTATTAAC ATGTGAATGG 1260
CCCCTGTCGC TGGGAAATAA AAAGAAATTT GACCTTGCCA GTACAGCCTG GCCCCTTCTC 1320
CCCACCCCAA GGAAAGCCTT CCTTAACCGT CTGGGCCTAG CGCTTTTTAT GATGCAGATT 1380
TGGAAGGGAG GACACAAAGA GAGGGTCGGC CGGGACAGAG GACACAAAGA GAGGTGGCCG 1440
GTTTGCAGGA GGAGGGGGGT AGCGAGGGTG GGAGGCGAGG GAGAAGTGGA GTGGGGTGGG 1500
GGACTGACAA CACCTCTCTT GTGGCTGGGG CTCTGCTTTG GTGTGGAGAA AGAAATATGG 1560
AGGAAGGGCG GCAGGAACTG GGAACAAAGT CTGGGGTGTG CATCCACCTC TGTCACAAAG 1620
AATCCTGAGT GAGAGAGGGG TGGGGTTGGG GAGGCGGGGA TCGAGGAGGG CTTCGTGCCT 1680
GTGCCGGGAG TTCACTGCAG GCTCTAAGCA GGAGGCCAGG TGTGTGTGTG AGCCTTGTTG 1740
GGCTCAGTCT GCCATTTCTC GGCCTGCCAG CAGGGCGGGT TCCAGCTCTT TCCTTGGTTC 1800
CTGGTTGCTC TGCCAGTCGG TTCAGGCCCG TGGGGTTCCC TGCCCCACAC TCACTCTAAA 1860
ACCTCCTCCC GGAGATCGCC CATGGTTCCT CGGGCACCGA GGCTGCTTGT GCGCACAGAA 1920
TGATGGCTGG GGCAGGGACT ATATTTGCTC CTTGGGAAGA AAAGCTAGAC CTGCTGTGGG 1980
AAGGTTCCAC ACATAGTAAG CCAAGCATGG GGCTGAGTGC AGAGAAGGCC AAGGCCCCTT 2040
CCCAGGAGAA GCTGTCCAAG CGAAGACCTG CCAGCCGAGT CCACGGGGCA AGAATATATT 2100
GTCCACTGGC AAAGGAATAC GTGGGAAGGG AGATGGTGCA AACATTTTCA GCATGTGCAA 2160
AGGCCCCGGG GCAAGAAAAT GTGTATCCTG TAGCTAAAGA CTCCAGTATG GCTGAGCTGT 2220
TGTGTATGGA GCCCCATGTA GAGGGAACGC TGGTTTTCTA CTGTAGGATC TTGTTTGATG 2280
CTTGGCTTTT GACAGCTACT ACAGGGAGCA CTGAAGCCCA GAGGGCCTCT CGTTTCTTCC 2340
TCTGTCAAGG TGCGTGCGTT CGTGCGTGTA CTCTGGGACA CTGAGGCAGG ATCCCTTCTT 2400
TGTCACAAGA CCCCCTTTGC CCTTCACCCC CGACTTTGCC CCAGCGCTTG ACCATGAAGC 2460
CGGGTGGCAC AGCCGGCTGC CTGTGCCTGC TTGAGGACCT GTGGTTGCAG AAACAGCTGG 2520
AGGGAAATCA ATTTGTTCTT TGCTACAGTC AGACATGAAC CAATTAGAGC TGCCCCATGG 2580
GGCCTCTGTG CTCAGGGAGA GAGAACAAGC CCGGGCCTGT TAATCCCTGC TCCCACCTTC 2640
TACCAGCCAG CAAAGTGAAG GGTGCAGCTG GAGGAGGGCC AAGCCTGCTC CCTCCTCACC 2700
GCTCCCCTGG ATCTGTGGTT GACCTTTGAC CTTCCACTCC ATGCCCAGCG TCTGGGTGAT 2760
TTCAGAGGTG CCTTGGGGCT ATGCAGAAGT GGTGGCCCGA AGAGCACCCA CCTCAAACCC 2820
CCAACACCAG GACTGGCCTC CGTTCTCAGA GCATCCATCC AACCCACCAA CTCCACCCAT 2880
ACTGGACAGA AGAGGTGCAG TGCACAATGT AACGGATTTC GTGTCTCTCT TTGTGCCACA 2940
GAGAGGCCCA GGGAGGGGCA CACGCATCAA GCATGTTGAG GAGGCTCAGC CAGGAGCGTT 3000
CAGGGTTAAA AAAGACCTCC TCAGCAGGAT GCATTTGGGG TTGGGGGCAG GAGCTGAGAT 3060
GTCCCTCTTC GAGGCTCCCT CATGCCAGCC CTATCAATGT CTGTGAGAAC TGGAGTGTGC 3120
CAGCTTCCTG CCTCCTTGTT GTCCAATGTC CAATGGGAAC TTGTGAGAGT CCGCTGTCAA 3180
GACAGTTCTT CCTCTGGCCA CTCACCATGG TTTTCTGCCC CTGCTAACCT CATCCCTACA 3240
AGCTGTATCT ATGTCCCTAG CCAGCGCTAG CCCACCCTAT 3280