EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM046-00188

Organism

Mus musculus

Tissue/cell

ESC_Bruce4

Coordinate

chr1:136241070-136241740

Target genes

Number: 8
Name	Ensembl ID

Gm8618	ENSMUSG00000073559
Chi3l1	ENSMUSG00000064246
Ppfia4	ENSMUSG00000026458
Tmem183a	ENSMUSG00000042305
Adipor1	ENSMUSG00000026457
Klhl12	ENSMUSG00000026455
SNORA61	ENSMUSG00000077202
Kdm5b	ENSMUSG00000042207

TF binding sites/motifs

Number: 7

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF14	MA0740.1	chr1:136241365-136241379	GGCCACGCCCCCAC	+	6.39
KLF16	MA0741.1	chr1:136241366-136241377	GCCACGCCCCC	+	6.62
SP1	MA0079.4	chr1:136241363-136241378	GAGGCCACGCCCCCA	+	7.03
SP3	MA0746.2	chr1:136241365-136241378	GGCCACGCCCCCA	+	6.57
SP4	MA0685.1	chr1:136241293-136241310	AAGGACCCGCCCCCTTC	+	6.09
SP4	MA0685.1	chr1:136241363-136241380	GAGGCCACGCCCCCACG	+	6.79
SP8	MA0747.1	chr1:136241366-136241378	GCCACGCCCCCA	+	6.11

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_03861

chr1:136240134-136241594

Cerebellum

Enhancer Sequence

CCCAAGGCGC ACTAACAGAG ACTCCTCCTC AAACTGTTCA GGGGAGCTGG AGCTGGGAAA 60
AGGGGTATCC TTCCCCGCGG AGTGGCTGTG GGTGCTCACC TGCGTGGAAT CGCCGAAGGC 120
CCAGCGGTAG CAGGGCGCCG CCCCCGACCT CGGCAGCGCG AGGCGTCCTA GAGGCAAGCC 180
TGCAAAGGTA GCTGCAGCCT CCACCGCCCA GTACCGTGGC CTCAAGGACC CGCCCCCTTC 240
CTCCGCGGAT ACCCTGGCCC CACCCCTAAG GGCGGGGCCT GGCCATATCC CCCGAGGCCA 300
CGCCCCCACG CCCGGGCGCT CCCCAGCCCT GGTTCGCACG TGACAAGGGC GCTGCTTTGA 360
TGCTGTGCGC CATCTTGGTC GAGCCTGAGA GGGCAGGGCA AGCATTTAAT CTGGTAGATG 420
TTCTGGCCCT AAAACTTGGA ATGCAGAGCA CATCCCTCTT TTCCTCTGTT GAACTCACCT 480
TCCTAAGTCT AGTCTGTTCC CTAAATGGCC AGTCGTCTGT CGCCCTTCAC ACCTGTTCTC 540
GCTCACATAT TTTTAAGTGG AGAAACTGGA AACCCAGATA CTCTTGTATT GTAGTATGTG 600
CCTCAGTGAA TTGTGACTTG CTTTTGGGCA TGTGACTGCC CTAACGCTGT TACTACAAAA 660
TGAAGTGTTT 670