EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM046-00148

Organism

Mus musculus

Tissue/cell

ESC_Bruce4

Coordinate

chr1:93030670-93031670

Target genes

Number: 6
Name	Ensembl ID

Lrrfip1	ENSMUSG00000026305
Rbm44	ENSMUSG00000070732
Ramp1	ENSMUSG00000034353
Ube2f	ENSMUSG00000034343
Scly	ENSMUSG00000026307
Gm17090	ENSMUSG00000090322

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Lhx3	MA0135.1	chr1:93030782-93030795	GATAAATTAATTT	-	6.17
MAX	MA0058.3	chr1:93031140-93031150	AGCACGTGGT	-	6.02

Enhancer Sequence

ATAAAAGGAC CCCCTGACTA ACGAATAAAA GGGTCCAGAT CCAGTTCTAA TTTGGGGTAG 60
AGACTCAGTT TGTGTTTTTT CATGAGATAA AGATAGAGCG CAGTGGCTGC CAGATAAATT 120
AATTTGTTAG ATGAACACAG ATTCTAAATC TTCTAAAGTA TCACCTTGAG GACTAAAATT 180
CCTCTTTTGC TTAAAAGTCG GCTTGAGGAC TCAGGCTCCA AAAAAGCTAC TCTCTGAGCC 240
AGCTCCCCGA CAGGAGGCTG GAGACTAGCC TCAGCTTTAC AGTTTGCATT TAAATAAAGT 300
ACCTAGAGTT CCCCCAAAAA AGTTCTGCTT TCCTACTTTC TCACTGTCTT TCAAGATTTT 360
GTCTTTCAAG CAGGTAAATC AACATTCTCG AGGCGGACCA GTGGATGTGC ATCCCCGCCC 420
CCCTAAAACA CACAGGTGGC AGCTGTTACC CCCAGTCTCA AGACATTTCC AGCACGTGGT 480
TTTCAGTCTG AGTTAAAAAT TAGGTTTACC AAGAGGGCTA AAAAAGTAGA TATTTCTATA 540
TTAATAAAGA TTGGTTTTTA TTTTGATAGA CAGGCTTAGC CCCTTAGCTG ACCTCTGGCT 600
TTTCACCCTT GCTGTTACTG CAAGGTGTCC TTAGCTCAAT AGGCTGTAAA AAAAACAGGG 660
ATGAGGAAAA ACGACTTCCA GCTCCTATTT TAGCCACAAA TCGTGGTGTT ACTAACGACA 720
TAATTCTTGC TTAGGCTTTG CTAATTCTGA GGTTGATAAT TCTCCTTTAA GAGCTGCACA 780
GCACTCAAAA CTGTACATAC TGGTTTGTGA TTGTACAAAT TCAGTATGGA CACCGCTTGG 840
TACAGAACTA CTACAAGAAA AGGTCCAGCT TGACCATTTC TGAGTTTCCT GTAAGATAAA 900
CCCGGTTTAA AAGAGGTTGG TATCATATTT TGGTTAAAAA TAAAAAATAT TTTCCGGCTC 960
TACCTCGCCT CCCCAAAAGA TACCCAGAGC CACATGTGTG 1000