EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM046-00042

Organism

Mus musculus

Tissue/cell

ESC_Bruce4

Coordinate

chr1:33983460-33984350

Target genes

Number: 8
Name	Ensembl ID

Prim2	ENSMUSG00000026134
Rab23	ENSMUSG00000004768
Zfp451	ENSMUSG00000042197
Gm15455	ENSMUSG00000081402
Bend6	ENSMUSG00000042182
Dst	ENSMUSG00000026131
U6	ENSMUSG00000084506
Gm16750	ENSMUSG00000085306

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

DUX4	MA0468.1	chr1:33984127-33984138	TGATTAGATTA	-	6.32
E2F6	MA0471.1	chr1:33983857-33983868	GGGCGGGAAGG	+	6.62

Enhancer Sequence

GACCAAAGCA GTGACTTCAC TCTGTTAGCT TAGTGAGTTT ATCCAAGCGC CTCATAGGAG 60
CATAGGTGAC TCAGGCGGCT TCATCACCTC AGAGCCATCA CAGCCAGCGA GGTGGTGACT 120
CGGGACTGAC CTGCTGGCAC TTTTAGCAGC AGCCTCTCCC CCAGCAACTG TTTACTGCTT 180
ATATAATACT GGGGACAAGG GGCTTGTAAG TCATGTAAGT TCAAGGAGCT TTCTGCTTTT 240
TGTAAGTTTT GCTCACTTCC TGTGCCTTCT AAGCTTCCTC CCCAATCTAA GGAAGAAGGA 300
ATGCTTAAAT GTGGAGGACA AATATAACTG GAAATAAAGT GTAAATGTCA CCAAAATGGC 360
TCAGCCAGTG TTCAAGGACA GTGGACAAAG CCTGGGCGGG CGGGAAGGGG AGGGCTTCCT 420
GAGCTTTTTG TCCGTAGCTT CGATTCTCTA GAGAAGTGTG TCTGTCCAGA GCTCTGTATC 480
CCTCCCCCGC TCCTCATGAC TCAGAACGGC TCCACCTCTT CCAGTTTAGA CTGCTGACTT 540
CTTTCTCTGT CTGCATACTC TCCTGGTTCT GAGACATCCC GGGCTCTTGA GGAATGCCTC 600
ATCTAGTCTA GTTACTGCTG CAGATGCTCG AGAAAGCCCA CCTGATGCTT ATCGTCTACT 660
GGGAGCTTGA TTAGATTAAT ACATACTTCG GCCATGAGTG AGACACACGT TTGGTGAGAA 720
TGCGAGGGTG TTTCCAGAGA GGGTTAGCCA AGGATTGAGA TCACCCCTGC TGTGGCAGCA 780
CCCTGTCCTA TAGGCTTGGG GTTCTCGATG AAACAGATGG GAAAAGGAGA AAGCCACCTG 840
CACTCTGGTA TTCCTTTCTC TGTTTCCTCA TTGGTACTTC GGACCAAACT 890