EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM044-02421

Organism

Mus musculus

Tissue/cell

Erythroid_spleen

Coordinate

chr13:23711560-23712780

Target genes

Number: 26
Name	Ensembl ID

Abt1	ENSMUSG00000036376
Btn1a1	ENSMUSG00000000706
Hist1h4h	ENSMUSG00000060981
Hist1h2af	ENSMUSG00000061991
Hist1h4f	ENSMUSG00000069274
Hist1h1d	ENSMUSG00000052565
Hist1h3e	ENSMUSG00000069273
Hist1h2ae	ENSMUSG00000069272
Hist1h2bg	ENSMUSG00000058385
Hist1h2bf	ENSMUSG00000069268
Hist1h2ad	ENSMUSG00000071478
Hist1h4d	ENSMUSG00000061482
Gm11398	ENSMUSG00000080741
Hist1h1e	ENSMUSG00000051627
Hist1h2ac	ENSMUSG00000069270
Hist1h2bc	ENSMUSG00000018102
Hist1h1t	ENSMUSG00000036211
Hist1h4c	ENSMUSG00000060678
Hfe	ENSMUSG00000006611
Hist1h1c	ENSMUSG00000036181
Hist1h3c	ENSMUSG00000069310
Gm11336	ENSMUSG00000080999
Hist1h2ab	ENSMUSG00000061615
Hist1h3b	ENSMUSG00000069267
Hist1h4b	ENSMUSG00000069266
Hist1h4a	ENSMUSG00000060093

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr13:23712450-23712462	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr13:23712454-23712466	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr13:23712458-23712470	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr13:23712462-23712474	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr13:23712466-23712478	AAACAAACAAAC	-	6.32

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_05883	chr13:23712177-23715261	E14.5_Limb
mSE_06466	chr13:23711231-23715201	E14.5_Liver

Enhancer Sequence

CACTACTTCT CAGCCTCTCT ATTTCCTTGA TTTATTTTCT CTGCCATCAT CTCTTCCCTA 60
AGCACAAGAT GCCAGTCTGC CTGGTGAAGA CACAGCTACA TCTGACAGAC CTGGATTTTC 120
CTCCTTCTGG CTTCAGCCTG CTTCCTGCTT TCCAGGTGTA ACAAGTGCAC CACCACTATG 180
GGCAAGGGGC ACCTAGGACA CATACTTGTT GAAAGCTGCC AAAGACGTGA ACTAAGTAAC 240
TGTTTAAGAT ACAGTAACAG AGAACCTAAT CATCCCTGAT TGCTTTTCCT TCTGCCAGAG 300
CATAATCTCT GCCAGTGGCA AATCCAGTCA CATTGAAATT GGCCTGCTTG CAAAGCAAGC 360
ATCTACAAAC AACCACATTT CTGTGGGAAC TCTTGTCTTA AACCCTTTTT CTATAAGACA 420
CATACCTTAT AAAAAGAAAA GGTTGTGGGT TGGAATGAAG AAGAAAGCAA AAGCTCCAAT 480
TGAAACGAAA TTGTTTGAGA GTGCTCATTT GTGCTCAAGG AGAGCAATCT CGGGATGCTA 540
AGGTCGGTTC AGTCTCTAGA AGAGGAACTT GGATACGTAA GCGCACAGAT AAAGAGCTGC 600
ATGCTTAAAA CATCTTTAGT TAATTTTAGT ACCTATAATT GATAGCAAAT TAACTATTCT 660
GAACTTGTAT GCCATGTGGA TGTATGTGCC AGTGAGTGTG TGGTTCCCTG AAACCATTAC 720
GATCACCCTC ATTTCCAGGG CACCACCGAG TTCACATAAA CACAAGTTTG AAGCATGAGA 780
ACCCTGGCAG GCATGGTAGT ACACGGGAAT AAATTTCACT TGGGAAGGAT TGAAAATTCC 840
GGGCTAACTT GGCCTATACT TCTTGATCAC ATGTCCAACA GATTGAGAAA AAACAAACAA 900
ACAAACAAAC AAACAAACAA AAACCAAAAA ACCGCATAGT TTTAAGTTTA AGGATACTTG 960
AAACAACAAC AACTCATTTG TTGAAAGAAT GCCTGGCTCT TTAAAGTCCT TGAAATCATT 1020
CGTGCAAATG CGCACTTGGT TTGTTTTCTT GGTAACAGGC TTGGTGCTCT GCCAGCTTCC 1080
TGGGCAATGC AGGAGAATGG CAGTCTGGAT CAACTGAGAT ATGACGGTTA CTCGCTTTTT 1140
GTAATGCGGC ACGATGCAGG CAATGTGCTT TAAAATGTAA TTGATGCCCA TGGCCTTGGA 1200
TAAGATGCTC ATGTTGGGGC 1220