EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM044-02345

Organism

Mus musculus

Tissue/cell

Erythroid_spleen

Coordinate

chr12:112752430-112753950

Target genes

Number: 8
Name	Ensembl ID

Tnfaip2	ENSMUSG00000021281
Gm266	ENSMUSG00000010529
Eif5	ENSMUSG00000021282
Mark3	ENSMUSG00000007411
Ckb	ENSMUSG00000001270
Trmt61a	ENSMUSG00000060950
Bag5	ENSMUSG00000049792
Klc1	ENSMUSG00000021288

TF binding sites/motifs

Number: 11

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CTCF	MA0139.1	chr12:112753640-112753659	AAGCCAGAAGAGGGCAGTG	+	6.05
IRF1	MA0050.2	chr12:112753257-112753278	AGACAGAAACTGAAACTGAAA	-	7.87
IRF1	MA0050.2	chr12:112753263-112753284	AAACTGAAACTGAAAGTGCCA	-	8.17
IRF8	MA0652.1	chr12:112753260-112753274	CAGAAACTGAAACT	+	6.14
IRF8	MA0652.1	chr12:112753266-112753280	CTGAAACTGAAAGT	+	6.44
IRF9	MA0653.1	chr12:112753265-112753280	ACTGAAACTGAAAGT	+	6.01
IRF9	MA0653.1	chr12:112753259-112753274	ACAGAAACTGAAACT	+	6.5
ZNF263	MA0528.1	chr12:112753227-112753248	AGAGGAGGAGGAGGAGGAGGA	+	10.23
ZNF263	MA0528.1	chr12:112753230-112753251	GGAGGAGGAGGAGGAGGAGGA	+	12.34
ZNF263	MA0528.1	chr12:112753233-112753254	GGAGGAGGAGGAGGAGGACTA	+	6.88
ZNF263	MA0528.1	chr12:112753224-112753245	GGAAGAGGAGGAGGAGGAGGA	+	8.67

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_06236	chr12:112752437-112753561	E14.5_Liver
mSE_06236	chr12:112753742-112758488	E14.5_Liver

Enhancer Sequence

CAGGAAGTAG GAAGGAGGCT GTGACAGACA TAACAGCCAA GGTCACTGTC CCCTTGGCCT 60
TTCATCTACC ACCGCAGAAA CGGGAACACA GACAGGCCCA GGCCAGTCAA ATCTAAGGGT 120
GTGTGTTGGC ATGAGTTTCA CCTCCCTCCT CTCGAGTTCC AGGGAATGTA AATGGTCCAG 180
GAAATCCACA CTTCCCACAG CCAGTGACCT AGTGTGGCAA GAATACTAAG GCTGGCAGCC 240
GTGAGGAGTC ACGATGGTCA ATCCTGTTCC CATAATTTAT TGGTGGCCTG GTTGAGGCCG 300
CTTGACCTCC TGAGGATACT GCCAACCTTT TATCCTTCTT TGGAAGCTGA CCTAGTCTCC 360
CTCCCTAGGG AAAGCAGACC TTGACCTGCA GGCATAGTCT GGGTTCAACC ACCCACCCCA 420
CTGAACAAGC CTGGCAGAGT AGCTGATGTC TCCAAGTGTG TGCAAAGCCA AGTACCCAGC 480
CCACACAGGG CAGGACTAGT CTAAAGGACA TGGAGCATGG ACTGTGTTCC ACACTGTACT 540
GGCTGCAGTG GAATGCTAGG ACCAGGCGAC TAAGCAGAGC AGGCAGGGTG AGGGGAGATA 600
CTAGCAACCC ACAAATAACA ATAGGAAAGA GGGCGACCGG AGAAAGGAAC CGAGCAAGAA 660
AGCTCAGCCT CGGAAAACAC AGCAGGAAAT TCAGAATGCA ATAAATAAAG GGCCGACTGG 720
GCACAGCAAG GCACACATCA GCAGATGGGA GGATCGCAGG GAGGAAGCCT CCTAGGAACA 780
GGAGGACTAA GACAGGAAGA GGAGGAGGAG GAGGAGGAGG ACTACGAAGA CAGAAACTGA 840
AACTGAAAGT GCCAGATGCA AGAGATGGAG AGAGAAGGGC AGCGCCAACC AGACATGGTG 900
ACCCAGGTTG TCCTCAGAGG GGCATGGTGT GATAGAGGAG CTTGAGGCCA GCTTGACCTA 960
CATGTGGCCC CATCTCACAA GAAGACATAG GGAGTGCTAG GAAAGGTGGT AGGGAAGGCA 1020
CACAAGCCCC AGGCAGCCAT GATGGCGTGC ACCTCTCATC CTGGCTGGCA TTTGGGAGAC 1080
ACTGCTTTGA ATAGAGGCTT TCTCTCAATC CTTTTGGGTT TTTAGATGTG TGTGTGTGTG 1140
TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG ATATGTGAAA 1200
ATTCCCTCCA AAGCCAGAAG AGGGCAGTGC ATCCTTTGGA GCTGGAGTTA AGAGGCAGCT 1260
GGGAGCCTAA TATGGGTGCT AAGAACTGGA CTTGGGTCCT CTGGAAGAGC AGCAAGTGCT 1320
TAACCACTGA GCCACTGCTC CAAGCGTCTA CCAATCACTA AGGTAAAGAT TTTATGTTGT 1380
AATATTTGTT GTTGTTGTTG TTTATTTTTG GTTTGGTTTG GTTTGTTTTG TTTTGAGACA 1440
AGATCTCACA AAGTAGACCA GGCTGGCCTC CCATGTGCTG GGATAAAAGT TGTAAGCCAC 1500
CACAGCCAGC ATTGAAAAAA 1520