EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM040-01687

Organism

Mus musculus

Tissue/cell

EpiLC

Coordinate

chr1:173200540-173200870

Target genes

Number: 13
Name	Ensembl ID

Sdhc	ENSMUSG00000058076
Tomm40l	ENSMUSG00000005674
Apoa2	ENSMUSG00000005681
Fcer1g	ENSMUSG00000058715
Ndufs2	ENSMUSG00000013593
Adamts4	ENSMUSG00000006403
Usp21	ENSMUSG00000053483
Ufc1	ENSMUSG00000062963
Dedd	ENSMUSG00000013973
Nit1	ENSMUSG00000013997
Pfdn2	ENSMUSG00000006412
Klhdc9	ENSMUSG00000045259
Usf1	ENSMUSG00000026641

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

E2F6	MA0471.1	chr1:173200605-173200616	GGGCGGGAAGA	+	6.14
Klf12	MA0742.1	chr1:173200804-173200819	GACCACGCCCTTCCA	+	6.8

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_06414

chr1:173199808-173202705

E14.5_Liver

Enhancer Sequence

ACCAGGTATG GTGGGCTGGG GACCACGGAG AGAGAGAGTC CTCGGAGAAA GGTTGGGGAG 60
GTCGGGGGCG GGAAGAGAAG AAGTTCTGAG TCAAGGCTGA AAAATCAGAT TGAGCACGGA 120
CAGGGTCTCG GATGGAAATG TGGACGCGGG CCGGTTGCTT TCACATTGCA CAGTAGGGGC 180
AAGCGCAAGA GACCGGGGTG GAATGGGCGT GTTCGAGGAG AATGGGGTTC TGATCCCCTT 240
CCCTTCGCGT GCAAGGCTCT GACCGACCAC GCCCTTCCAG GTGAGCCGGC CCAGGTCTTG 300
GGCCGATCCT GTCCCAGCCC TTCCGCTCTG 330