EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM040-01326

Organism

Mus musculus

Tissue/cell

EpiLC

Coordinate

chr1:137527770-137530560

Target genes

Number: 8
Name	Ensembl ID

Rnpep	ENSMUSG00000041926
Shisa4	ENSMUSG00000041889
Ipo9	ENSMUSG00000041879
Nav1	ENSMUSG00000009418
Csrp1	ENSMUSG00000026421
Phlda3	ENSMUSG00000041801
Tnni1	ENSMUSG00000026418
Lad1	ENSMUSG00000041782

TF binding sites/motifs

Number: 12

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr1:137530170-137530188	GGAAGGACTGAAGCAAGA	+	6.08
MSC	MA0665.1	chr1:137528194-137528204	AACAGCTGTT	+	6.02
MSC	MA0665.1	chr1:137528194-137528204	AACAGCTGTT	-	6.02
MYC	MA0147.3	chr1:137528294-137528306	GCCCACGTGCTC	+	6.27
MYF6	MA0667.1	chr1:137528194-137528204	AACAGCTGTT	+	6.02
MYF6	MA0667.1	chr1:137528194-137528204	AACAGCTGTT	-	6.02
SPI1	MA0080.4	chr1:137530281-137530295	GACTTCCTCTTTTT	-	7.01
SPIC	MA0687.1	chr1:137528229-137528243	CTAAACAGGAAGTA	+	6.08
SPIC	MA0687.1	chr1:137530281-137530295	GACTTCCTCTTTTT	-	7.34
Tcf21	MA0832.1	chr1:137528192-137528206	GCAACAGCTGTTAA	-	6.44
Tcf21	MA0832.1	chr1:137528192-137528206	GCAACAGCTGTTAA	+	7.06
ZNF740	MA0753.2	chr1:137528079-137528092	CCCCCCCCCCCAC	+	6.92

Enhancer Sequence

GCTGCCTGGG TACCACTAGG ATTTCCCATC CAAAAAAAAA AAAAAAAGAT TTCCCATCTG 60
AGAAGATCTC CCTGACCTTC TCTGAGGAGA AGAGAGGCCC TGAGCTCCGT CTCCATGCCA 120
CGTACACAAC AATGCTCTTC ACTCCTGATC TATCCTGGAC ATCTCTAGCA ATGATGCCTT 180
CTTGAGGAAG TTAGTCTGCT GCCAAGTACT GTGTCTGGAT CAGACTAGAC AATCAATATG 240
CTGGTCTGCT TCTTGGTCCC TGAAGCTGGG CTCCTCTCCT CTGTCCCTTA CAGAGGCAGG 300
ATGGTCAACC CCCCCCCCCC ACTCTTGTTC TCTGCGGGCC CCGGAATGAA GGCTCCTGGG 360
AAGGATTGGC CTCACTTCAT CTCACTGAGC TGCTAGCTCA CCAGTCTAAA TGAAGAACAT 420
GAGCAACAGC TGTTAAGGAA GCTGACCTGG ACTTCTGGGC TAAACAGGAA GTAGGGTGGA 480
GGGCAGGGGC GGAGCTTCCT GAGGAGTAGG AAGGAGGAAA TCTGGCCCAC GTGCTCCCTG 540
TGTTATCGTA GCTTGGCACT CAGCCCAGCA GAGCAGAGGC TGCAGCCTGC AGGAAGGTGT 600
CTGTAGATCC AGTCTTCAAA CATTAGCTGG AAGCCCTCCG GGGCATGTTA GGATGTTATC 660
TGATCATCTG TGGTTTGCAC TACGAGCGCT GCTCACTCAG AAAGTCTCAA CTCCAATCAA 720
CACAGAGCCC CCAGAAAGAT GGTAAGATTG GAAGTGGGAG ATATGCGGTA AAGACAGGTA 780
TGTGTGAATC CCAGGAAACG CTGGGTGCTT TGAGAAGGTA GAGGCTGGGA AGCAAGAGGA 840
GGCTGCAGAA AACCCAGAAC ACTCTAAACT GCTGTCCTAG GGTTTCTATT GCTGTGAAGA 900
GACACCACGG CCACCACAAC TGTTATAAGA GGAAACATTT ATCTGGGGCT GGCTTACAGT 960
CCAGAGGTTT AGTCCATTAT CATCATGGTG GGAAGCATGG TGGCATACAG GCTGACATGC 1020
ATGCAAAAAT TACAGGAATT CTACATTTGG ATCCTCAGGC ATCAGGAGAG ACAATGACAC 1080
ACTGGCCAGG CTAGAGCATC AGAGACCCCA GAGCCCATTC CCAGTGACAC ACTTTCTCTG 1140
ACAAGGCCAT ACCCACTCCA GCAAGGCCAC ACCTCCCAAT AGTGCCACTC CCTATGAGCC 1200
TATGGAGCCA TTTTCATGCA AACTACCCCA CTTGCCCATA GGCGTGCTTC ATAGTTGTTG 1260
GCTCTGATTA CAAGGTCACT TCTGCAGCCC TTGGGCTAAA CCAGAGTTCC TTCTGTGTGT 1320
TGTTAAAACT CATCCTACCT GTTCAGTCTC TTCCCACAGG GCTGTAAGTT CAATGGGGGC 1380
ATTCTAGAAG CCCATCACTA CCTCCCACAA CCCTGTTGTG TGGTCAATAA ATACGGTTAA 1440
ATAGATAACT ACACAAAGTA CTTTGGGAAT GACCAAAAAG GGAAGCTTGG GGCTGACGAG 1500
ATGGCTCTGC AGTTAAGGGC ACTGACTGCT CTTCCAGAGG TCCTGAGTTC AATTCCCAGC 1560
AACCACACAG TGGCTCACAA CCATCTGTAA TGGGATCTGA CCCTCTCTTC TGGTGTGTCT 1620
GAAAGCAGTA TACTCACATA TATAAAATAA ATAAATCTTT TTTTAAAAAA AGGAGGGAGA 1680
GTCTGTAGGA AGTATATGTG TGTGTATGTG AGAGAGAGAG AGAGAGAGAG AAAAAAAAGA 1740
ATGACAGTGT TAGTCCTTGA GTGATCTAGA AAACAAAACA AAACAGGAAT TCTTTGGCAG 1800
TCTAACCCAT GAGGGTACCT CTCAGGCCCA GGTGGTAACG ATATGAGGTT GTTCATATTC 1860
CCTTGGTGTG TCCGAAGCCC TGGCTAACTT AGGGCTAGCA TCAGCGTCAG TGTTGGATTA 1920
CCCCCAAGGA GAGAAGAATA TCTGCCGTCA GGAAGCATCC AGGTTGGAGG ACACATGAAG 1980
GTGCTTCTGG GGCTTTCCAG CCTTACGGGA GAGATGAGGT CCACAAGGCA GACAGACGCT 2040
TGAGAGAAAT GCAGTGACAA GAGACAAGAG TATATGTGAC ATTCACTGTG TACCAGCCAC 2100
TGCCCCTAGC CTTTCATATG TATCAGCTAA TTTCACTTCA GAAAACCCTG TGATGTGGAA 2160
AATGTTACTG TTTCCATTTT ACAAGTAAGA GAAAGGAGAC TGACTCTGGT CGAGGCACTC 2220
ATCTTAATCC CACTAAGACA CAGATTAGAT TGGCCAATAT TTAAGTCCAA GCTGCAGGCC 2280
TCAGAGCCTT CTTGGCTTCC CATGACATCT CTGACTAAAA CGACATAGAC AACTTCTGGG 2340
GAGCTAGTCA CGAAGTGAGA TAACCACAGT TAATGAGCGT ACCAGAAGAG GGGCATGCTG 2400
GGAAGGACTG AAGCAAGAGG TAAAGAATAT CCTGGTTACA GAAGACGCAC ATGTCATAGC 2460
AGAAACAGCA CAAGAATACT GCTTTCAAGT TATCCCAAAG CAGTGGGAAG GGACTTCCTC 2520
TTTTTCTCTG GGCTGTAAGA CAGTGGTCAT GCTGGAGAGC CAGACTCTGA TCCTGACCTT 2580
TCACTGTGCA TAGCTGTTCC AGCCTGTCCT TCCCCAGTTC AAAGCCTGCC CCTAGATTAA 2640
CTAAAAGCCA GGTGTCTTAG GGTTTTATTG CTGGGAAGAG ACACCATGAC CATGGCAACT 2700
CTTATAATGG AAAACATTTA ATTAGGGCTG GCTTACAGTT TCAGAGGTTT AGTCCATTAT 2760
CATCATGGCA GGAAGCACAG CACCATGCAG 2790