EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM040-01231

Organism

Mus musculus

Tissue/cell

EpiLC

Coordinate

chr1:134183980-134185200

Target genes

Number: 7
Name	Ensembl ID

Slc45a3	ENSMUSG00000026435
Elk4	ENSMUSG00000026436
Cdk18	ENSMUSG00000026437
Gm7241	ENSMUSG00000089808
Nuak2	ENSMUSG00000009772
Tmcc2	ENSMUSG00000042066
Tmem81	ENSMUSG00000048174

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

GLIS2	MA0736.1	chr1:134184956-134184970	GACCCCACGCGATG	+	6.01
POU2F2	MA0507.1	chr1:134185059-134185072	AAATGCAAATTAA	-	6.25

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_09953	chr1:134183026-134186140	MEF
mSE_10237	chr1:134183954-134185513	Embryonic_stem_cells

Enhancer Sequence

GAAGCCCAGG AAAGATTACT CTTGTCTGTA GGGGTCTAAC CAGCCTGGAG CCAGTGGTAT 60
TCAGGCTGAG CACTAAAGGG TGCAAGAGGT TTTAACAAGC AGGGATGAGC ATGTAAGGCC 120
CAGCGCACAG CTATGAAATG GAAAGGTCTT AGCTATCAGC AGTAAGGCTG GCAGGGAGCT 180
CAGCTGCCTT TGGGCTTATG TCATTTGGGA GCCCTGCTCT TGAAGGTCAG GGCCAGCCAG 240
TTTCAGCCCC CAGGGACAAG GGGGAGTGTG ACAATCAAGA GAGAGCCAGA ATGGGAGCCC 300
AAGACCAGAG TTGGCTCCTG GCTGAGTGTC ACATAGAACT TGGTGTCACA AGGTTCATCT 360
CCCCCATCTC TGTCTTCCCC CTTCTTCCTT TCGAATGGGG AGTAATAAGA CCCCACTCAC 420
CTCCCACCTG TGCTGTAATT ATCAAACGCA GCACACGGAC TAAAATGCAA AGTACTGCTC 480
TTCAAGACCA AGAAGGGTTA GTGTGGCCTC TCAAAAAGCT CTGGGGGAAA ACACAGAGGC 540
AAAGGGCATT TGAAAGGAAG ACTCAAACCC CTGGGAACAG CGCCTGACTC CTAGCAGAAG 600
TGGGCCAGTA ACCGCCCTCA TAACTTATTA ATTCACTTTA TTCATTCATG CAGCAAATAT 660
TCCTTCTGTG CCCTCTAAAT GCCAGGCTTG GGACTCCATA TTGGGCAAGT GGTGAAAGAG 720
ATGGATGGAG ACCCTGCGCT GAGTTATCTT TAAGCAATTT GAAAAATTGG CAGCCTGAAG 780
GCTTCTGCAC CACTGGCCAC CTTCCAGTTT TTCTCCAGGA TTGGTGCGAT TCATTCTGAA 840
TTGAGCCAGG CTACCAAGAC CTCCTCCCAG CATACGCGAA CACCCACCCC TCTGCCCTCT 900
GCTGACGGGC TCTGCCATCA GCAGCTCCAT CCAAAGGCTT CGCTCAGACA TCCCACGCAT 960
CCCTGGAACC TTCCCTGACC CCACGCGATG AACGGAAGTG CCTTAATATT TAAAGAGGAA 1020
TGAATTTTCT AATTAGCACC CAAACACTGG AGCCTGGCCC TTCCTGACCT TACCTATTTA 1080
AATGCAAATT AATCTTCCCC GAGGAAAGCG GATAAGTGAA GGAAACCTCA AAGGGTAGAG 1140
AAGCAGGCAG GAGGCCAGGG GTGCTGATCA GAGCTGTCAC TTTTGTCCCT GCTACTGACT 1200
TTGCTGCCTG GCACCCACAC 1220