EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM034-09305

Organism

Mus musculus

Tissue/cell

Dendritic_cell

Coordinate

chr19:4151890-4152520

Target genes

Number: 18
Name	Ensembl ID

Tcirg1	ENSMUSG00000001750
Unc93b1	ENSMUSG00000036908
Cdk2ap2	ENSMUSG00000024856
Pitpnm1	ENSMUSG00000024851
Aip	ENSMUSG00000024847
Tmem134	ENSMUSG00000024845
Cabp4	ENSMUSG00000024842
Coro1b	ENSMUSG00000024835
Ptprcap	ENSMUSG00000045826
Rps6kb2	ENSMUSG00000024830
Carns1	ENSMUSG00000075289
Tbc1d10c	ENSMUSG00000040247
Ppp1ca	ENSMUSG00000040385
Rad9	ENSMUSG00000024824
Clcf1	ENSMUSG00000040663
Pold4	ENSMUSG00000024854
Ssh3	ENSMUSG00000034616
Kdm2a	ENSMUSG00000054611

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Esrra	MA0592.2	chr19:4152136-4152147	TTCAAGGTCAT	+	6.62
Esrrg	MA0643.1	chr19:4152137-4152147	TCAAGGTCAT	+	6.02
Nr5a2	MA0505.1	chr19:4151949-4151964	AAGTTCAAGGTCAGT	+	7.91
Nr5a2	MA0505.1	chr19:4152133-4152148	AAGTTCAAGGTCATC	+	8.12

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_00606	chr19:4113071-4155496	pro-B_Cells
mSE_01385	chr19:4093691-4170314	Th_Cells

Enhancer Sequence

ACACCTGTCA CCCCAGCACT TGGGGACTGC CAGCACAGAG GCCACCAGGA CCACACAGAA 60
AGTTCAAGGT CAGTTCAAGA CCCTGTCTCA AACATCAACA GGACAAAGGA AAGGGATGGG 120
CATGTGGCTC TCCATTGGTG CAGCGCCTGC CCAGCAGAGC CCATGGCTTT ACCATGGCAC 180
TGTAAAGCAA AAGCTGCAAT GCGTGCCTGT GATTCACCCG GGAGGTAGCC CTGGGAGGAG 240
CACAAGTTCA AGGTCATCCT TAGCTCTGTA GTGAGCTTAG GCTCGGGGCC AGCCTGGAAT 300
ATATGAAACC ATGTTTCAAA AAATAAAGAG AGTAAAATAA AGAGCACTCA CTCCTTTAAT 360
CCTAGCTTCT GGCAGAGGCA GGTCGAACTC CATGAGTTTT AAACAAGGCT GGTCTATACA 420
GTGAGACCCT ATCTCAAAAA GAGACAGAGA CAGAGAGAGA AAGAGAGAAT AAGAATCACA 480
ATTGTAAGGT TGCCTAGGGT CATGCTCTAG GGAGGCCATG AACTCACAAG GCAGCCTGTG 540
TGTGTGGTCT CAGGTCTACC TGTGGGAATA TCCAGGTGGG GAAACTGGAA AATTGTGGGA 600
GGTTCCACCA TGACTCCCCT CCCTTTTCCA 630