EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM034-09293

Organism

Mus musculus

Tissue/cell

Dendritic_cell

Coordinate

chr19:4115490-4115980

Target genes

Number: 14
Name	Ensembl ID

Tcirg1	ENSMUSG00000001750
Ndufs8	ENSMUSG00000059734
Gstp2	ENSMUSG00000038155
Cdk2ap2	ENSMUSG00000024856
Aip	ENSMUSG00000024847
Tmem134	ENSMUSG00000024845
Cabp4	ENSMUSG00000024842
Coro1b	ENSMUSG00000024835
Rps6kb2	ENSMUSG00000024830
Carns1	ENSMUSG00000075289
Tbc1d10c	ENSMUSG00000040247
Ppp1ca	ENSMUSG00000040385
Rad9	ENSMUSG00000024824
Kdm2a	ENSMUSG00000054611

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

GLI2	MA0734.2	chr19:4115835-4115850	CGAGGTGGGTGGGCA	-	6.22
TP53	MA0106.3	chr19:4115632-4115650	TACATGCCTGGGCATACC	+	6.05
TP53	MA0106.3	chr19:4115632-4115650	TACATGCCTGGGCATACC	-	6.25

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_00606	chr19:4113071-4155496	pro-B_Cells
mSE_01385	chr19:4093691-4170314	Th_Cells

Enhancer Sequence

CTCTACCTGC CAAGGCAGGA ACCAATTCAA AGCAGAGCCC ATGGGTACCT CGGAATCCTC 60
TGCAGCAAAC CTGGCCTCTG ACATCAGATG CTGGAAACCA TGTCACCTGA CCACTGGTCT 120
CTTAGCACGT GTCATCAGCC CCTACATGCC TGGGCATACC TAGTACTAAG TACTTCAGGT 180
AACAGTGAAG ATGGTGGCAA GTACCCATGC CCTGGCAGAG TTTCTGTTCC ATGGAAAGTA 240
ACCTATGTGG GCAAGAAGAG CCACCTAAAC CCCCAGTCCC TTCAGAGCAT GGCCAGCTGG 300
CCAGCTGTGG AGGAAAAGAT GGGCTCACAG ACAGAGGACA AGAGTCGAGG TGGGTGGGCA 360
TAGGTGATCA ATGAGGCCTG AGAAGGGCCC TAGAGGCTTC CACAGTTTTC CTACCCTTGC 420
CCCTTTCCGC AGACCAACCC TGGACATCGG GGAGGTAGGG CTAGTGTCCC CTTTGAGACA 480
GGGGGCCTTA 490