EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM034-08317

Organism

Mus musculus

Tissue/cell

Dendritic_cell

Coordinate

chr17:36061850-36063140

Target genes

Number: 21
Name	Ensembl ID

Vars2	ENSMUSG00000038838
Gtf2h4	ENSMUSG00000001524
Ier3	ENSMUSG00000003541
Flot1	ENSMUSG00000059714
Tubb5	ENSMUSG00000001525
Mdc1	ENSMUSG00000061607
Nrm	ENSMUSG00000059791
Ppp1r18	ENSMUSG00000034595
Dhx16	ENSMUSG00000024422
2310061I04Rik	ENSMUSG00000050705
Atat1	ENSMUSG00000024426
Mrps18b	ENSMUSG00000024436
Ppp1r10	ENSMUSG00000039220
Gnl1	ENSMUSG00000024429
Prr3	ENSMUSG00000038500
H2	ENSMUSG00000053835
Gm11127	ENSMUSG00000079492
Gm9574	ENSMUSG00000073980
Gm10499	ENSMUSG00000073403
Gm8909	ENSMUSG00000073402
Gm20392	ENSMUSG00000092362

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr17:36062013-36062031	CCCTGCTTCCCTCCCTCC	-	6.33
Nkx3-2	MA0122.3	chr17:36063112-36063125	AATAAGTGGTTTT	-	6.14
Stat6	MA0520.1	chr17:36062779-36062794	GAGTTCCAGAGAAAC	+	6.25

Enhancer Sequence

GAAGGTGTGT GTCAGAGTCC GGCCTGGCCC GGCCTCACTT GCTCGCTCTC TCTCTCTCTC 60
TCTCTCTCTC TCTCTCTTTC TCTCTCTCTC TCTCTCTCGG AGGCTGCTGC TGGCTGCCTT 120
ACTGCCTCCT TTACTGGCTG TCCTTTCATT TTTGCTTGCT CAGCCCTGCT TCCCTCCCTC 180
CCTTTTTCTG TGTCTTTCTG AGAGACAAAC TTTCTCTGTG TAGCCCTGGC TGTCCAGGGA 240
CTCACTATGC AGACCAGGCT GGTCTCGAAC TTCCAGCTTA CTTGCCTCTG TCTCCAGAGC 300
ACTAGAATTG AAGGTGTGCC ACCACGCCCA ACTGGTGATC CCTTTCCATT CCAAATGAAA 360
CTTATTTTTT ACATGGAGTA TGCCTACTGG GAAACATTTC TGTAGGAGTG GGGTTTTGCT 420
GTTGTTTATT TGATGTGGCA TCCCTTTGTA TGGCCTTGGC CGACCTGGAA CTCACTTGGT 480
AGACCAGGTT TGCCTCAAAC TGGTCTGGCC TTAGAGACTG GACTGGCTGT GAATCCATGG 540
CAGTCCTTTT GAGTACTGGA TTAGAGGCAT GAACCAAGAT ACCCAGCTTA CAAGACTTAT 600
CTATTCTGAT AAAAATACAG ATTTATCCCT ATGTTTAATG AAAATGGTCA TTCAAGACCT 660
TTAATATCAG GGGAGCTTGT GAATGTGTCA GGAGTTCTTC ACTGTGATGA ACTATCCCTT 720
AAGGCAGGCA AGGGACCCAC TTTACTTTAA ATCACATTAC TGGCCTTTAG AGCTGTTTAT 780
CTGTTTCTGG GGAGGAAAGC CAGAGTACCC TGCATACTGA GTAAGAACTT AAGCATTGCC 840
GGGCGTGGTG GCGCACGCCT TTAATCCCAG CACTTGAGAG GCAGAGGCAG GTGAATTTCT 900
GAGTTTGAGG CCAACCTGGT CTACAAAGTG AGTTCCAGAG AAACCCTGTC TCGAAAAAAA 960
AGGAAAAAAA AAAAAGAACT TAAGCATTAA ATGGAAACTA CACTCTAGCT TTCTACCCTT 1020
TTTAGTTTTA TTCTCAATAT TTGGTTCTTT GGAATACTGA CATTTTCCAG TTTTATGATG 1080
TCTTTTGAGT GTCCTTAGTA ACTGAGAGGA CATGTCCCAG GCAGAGGAAG GACGCTCTCA 1140
TTACCACTGT CTCCCTCATT TCTTCCCAGT TGGCCCTAGA CTGCTTTCTC CCTTGAATAG 1200
AGGTTTTTTT TAAAAAAAAT GTTTATGTAT TTTTTTTTGC TGGAAATACT AAATTATTGC 1260
TAAATAAGTG GTTTTTCTCC CCCTTTTCAC 1290