EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM034-03524

Organism

Mus musculus

Tissue/cell

Dendritic_cell

Coordinate

chr11:97580250-97581040

Target genes

Number: 11
Name	Ensembl ID

Mllt6	ENSMUSG00000038437
Cisd3	ENSMUSG00000078695
Pcgf2	ENSMUSG00000018537
Psmb3	ENSMUSG00000069744
Pip4k2b	ENSMUSG00000018547
Cwc25	ENSMUSG00000018541
Rpl23	ENSMUSG00000071415
Lasp1	ENSMUSG00000038366
B230217C12Rik	ENSMUSG00000050538
Arl5c	ENSMUSG00000038352
Rpl19	ENSMUSG00000017404

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr11:97580366-97580378	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr11:97580370-97580382	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr11:97580374-97580386	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr11:97580378-97580390	AAACAAACAAAC	-	6.32
Klf1	MA0493.1	chr11:97580455-97580466	TGGGTGTGGCC	-	6.62
Nkx3-2	MA0122.3	chr11:97580403-97580416	AAAACCACTTAAT	+	7.22

Enhancer Sequence

TGCCTGGAAC ACACAAGACA TGGACTTGGG TCAGAGGTTC AAGCCTGACC AGAAGCCCAG 60
GAGGTGACAG CTGAGAGGCA TGGAGTCTGC TGGGGCTTTT CTATTTATTG TTTAGAAAAC 120
AAACAAACAA ACAAACAAAC AACAACAACA ACAAAAACCA CTTAATTTTA AGACTACTGG 180
TTCTGGTTCT CAACCTTCAT GGTTTTGGGT GTGGCCAGTG CTGACTGAAT TTAGTCTTCC 240
TGCCTCAGTC TCACAAGCAC TGGTGTGTCA TTAGACAATG AGCCTGTCAT TCAGCACCAA 300
GGATCACCAG GCTGGGCAGG CCACCTAAGG AAGTGGCTTG TATGTCACAT CAGAGCTCTC 360
TGGGGCTCTC CTCTGACTGA CACACTCACT TTAGAAGTAG AAAGACAACG TAGAGGTGGC 420
ACAAAGGTCC TGGCCTCTGT GGGGGACAGT GTGTGGGGAG CCCGGTCTGT GGGGAGCACT 480
GTGCGCGTGT AAACAAAGCT ATTCTTGGCT GTTCAACAAG ATGTGCAGCG CCCAGCAGCC 540
CCCGGGGGAA GGCAGCCGGC AGCTCAGGCC CAAAGGCCAG ACAACTCCTG GGAAAACCAA 600
GGTGTGTTTA TCACCTGGCC AGGCTGGGCA GAGATGGAAA CGCAGGCAGA CAAGGGAAGG 660
CAGCGGGGTT GCTCTCCGAC GCAACTGGGG AGAAGGGCAC GGGCACTTCC CCAGAGCACC 720
CTCTGGGCGC TCTGAGAGGG GCACAGATGT ACTGCACTAG GCTGGGCCCG GAGGAGGCTG 780
GGAACCCACT 790