EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM032-05639

Organism

Mus musculus

Tissue/cell

Cortex

Coordinate

chr8:73315050-73315680

Target genes

Number: 14
Name	Ensembl ID

Crtc1	ENSMUSG00000003575
Tmem59l	ENSMUSG00000035964
Pgpep1	ENSMUSG00000056204
Gm11175	ENSMUSG00000080058
Pde4c	ENSMUSG00000031842
Rab3a	ENSMUSG00000031840
Mpv17l2	ENSMUSG00000035559
Ifi30	ENSMUSG00000031838
Pik3r2	ENSMUSG00000031834
Mast3	ENSMUSG00000031833
Il12rb1	ENSMUSG00000000791
Arrdc2	ENSMUSG00000002910
Slc5a5	ENSMUSG00000000792
Bst2	ENSMUSG00000046718

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF16	MA0741.1	chr8:73315248-73315259	GCCACGCCCCC	+	6.62
SP1	MA0079.4	chr8:73315245-73315260	GAGGCCACGCCCCCA	+	7.03
SP3	MA0746.2	chr8:73315247-73315260	GGCCACGCCCCCA	+	6.57
SP4	MA0685.1	chr8:73315245-73315262	GAGGCCACGCCCCCAGA	+	6.54
SP8	MA0747.1	chr8:73315248-73315260	GCCACGCCCCCA	+	6.11

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_01561	chr8:73314859-73371125	Th_Cells
mSE_04239	chr8:73314242-73316386	Cortex

Enhancer Sequence

AGAAGGGCAG TTTGCAGGCC AAGATAGGAG GTGCCGCAGG CAGCAAAGGG CATAGGTTTT 60
AGGGAGCTGA GCCCAGCCTG TCTGTTGCTG CAGGAGGCTC TGTTTTCCCC ATCAGGACAA 120
CCAGAAGGTG CACAAAATCA ACACACCCTG TGAAGCTGGC CTTGGGGGAC CTATGCTCTA 180
AGAGCCTGCC TACAGGAGGC CACGCCCCCA GAGTCAGCTA AGCCACAGGT GTGGACACAG 240
TACAAACCAG CATTGAGCTG GGGGACCCAC CAACTGTACC TGCTCTTCAC ACAGGGAAAT 300
CGGGGCTACC AGCTACCAAG AGGGTAAAGA ATTGCCCCCT AGGCTGAAGT GTGGGTGCAG 360
AAGCGGAACC CAAAGGGCCC TGCAAGACTT CCTGTCGCCC CCCCTCTGCA CACGACACAC 420
ACTGGCAGCC ACATCCTCTC CCTGCCCTGC TGTCCCATGG TCCTGCACCG GTAGCCAATG 480
AGACTGGTTG GTTCCTTTCC CTTATGCTTA GACAAGACCT TGAAAACAAC CATATTGGAC 540
GCCTCAGAGA ACCTGGATCA TCTCACTTGA GCACACATTA AATGCCAACT GCTTACACTG 600
TTCCTTGCTC TAAAAGGCCT GTAAGCCATG 630