EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM032-04349

Organism

Mus musculus

Tissue/cell

Cortex

Coordinate

chr4:154938080-154938560

Target genes

Number: 19
Name	Ensembl ID

2610002J02Rik	ENSMUSG00000073684
Prkcz	ENSMUSG00000029053
Gabrd	ENSMUSG00000029054
2010015L04Rik	ENSMUSG00000042233
5830444B04Rik	ENSMUSG00000084803
Tmem52	ENSMUSG00000023153
Gnb1	ENSMUSG00000029064
Gm13171	ENSMUSG00000082429
Nadk	ENSMUSG00000029063
Slc35e2	ENSMUSG00000042202
Gm16023	ENSMUSG00000086682
Cdk11b	ENSMUSG00000029062
Mib2	ENSMUSG00000029060
B930041F14Rik	ENSMUSG00000091921
Ssu72	ENSMUSG00000029038
U6	ENSMUSG00000064916
Atad3a	ENSMUSG00000029036
Vwa1	ENSMUSG00000042116
Mrpl20	ENSMUSG00000029066

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

TBR1	MA0802.1	chr4:154938492-154938502	AGGTGTGAAA	+	6.02
TBX2	MA0688.1	chr4:154938491-154938502	GAGGTGTGAAA	+	6.14
ZEB1	MA0103.3	chr4:154938169-154938180	CCCACCTGCCC	+	6.14

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_08410

chr4:154937745-154945195

Liver

Enhancer Sequence

AGCCGACGGT GAGTGCGGGG CCTGGGGTCG CCCTCTGCCC GGCGTCACTG GCCGGGACCC 60
GTGAAGACAG GGTCACGGCG CCGGCCCTGC CCACCTGCCC GAGGCCGGGC GCTGGTGGCT 120
CTGACGCGCC TCCCTGCGTC CGAACGTGGG TTGCAGCCAG GATGACGCGT GGTCTCGGGG 180
AAGGAGCCTA AGGGACAGGT CTGAAGATCT GGTCCGGCCT TGGGTTTAGG GGGACGAGTC 240
AGAGGTTCGG GTCCCGGGAG AAGCCATGTA GGCCGCCGTT CTGTTCTAAG CCAGTTCAGC 300
GCGCAGCACC GCAGCCGAAT CGGCTCCATT GGTCTTCCAG TGGGGCCTTA GCAAGCGCCA 360
GAGACCTTGG CATGTGGGCA AAGTAGTCAG ACGAGCGTTT TGTAAGCAAT CGAGGTGTGA 420
AACTCTCCAA AACCCCATCG TAAACTTGGT ATCCAGTACT TGCCAGGAGC TTCCAAAGTC 480