EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM032-02867

Organism

Mus musculus

Tissue/cell

Cortex

Coordinate

chr18:38174150-38174820

Target genes

Number: 8
Name	Ensembl ID

Pcdhga9	ENSMUSG00000023036
Diap1	ENSMUSG00000024456
Hdac3	ENSMUSG00000024454
Rell2	ENSMUSG00000044024
Fchsd1	ENSMUSG00000038524
Arap3	ENSMUSG00000024451
2010320O07Rik	ENSMUSG00000089983
Rnf14	ENSMUSG00000060450

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Gata1	MA0035.3	chr18:38174255-38174266	AGAGATAAGGA	-	6.02
RARA(var.2)	MA0730.1	chr18:38174509-38174526	AGGTCATCACACGGTCA	+	6.14

Enhancer Sequence

CGCGGACACA CACACACACA CACACACACA CATATGCGGC TCTGGTTTCT GGTCTTCTTT 60
CTCCAGGGAC CCAAGGAGTC CTCTGGTCTC TCCAAACTCC TTAGAAGAGA TAAGGAGGGA 120
AGTACCATGG TACGGTACAC AGACTGGCAG CTGGTAATTT CACCATTTCC TGGCTGAGTG 180
ACCTTGAGAA CGAAGTTTAA TTTCCCTGTG CCTCAGTTTT ATCATCAGTG CAATGGGATT 240
AATGATGGTA CTCTGCAGTA AGGAGTCCAT GCTATGATAA TTATGTCAAT GCTCAACATA 300
ACTGCCTTCA AGCACAGGAA GCAAGAAACT GTTAATCTTT CGATTCTCGC TGGCCTTGCA 360
GGTCATCACA CGGTCAGGAC TTGGAGAAAG ATTTACAGAC GAACACAGCT CAGACATGTG 420
CACAAGTGGA TTCCTGTCTG TGCGTGCACA CACGAGCAGA CACACAGCTG ACAGCTTCTC 480
GCACTGACAG GCGCACACGC GGGTACACAC ATTCAGAAAC ACACACAGGA GGAGGCTGTG 540
GGAGGTGGAA TCTGAGTCAT CGAGACCAGA GCTGTGGGTG GCGCTTTTGT CCTGATTTCC 600
GGGGCTTGGT GCTCCATTTC GAACGAGGAA ATGTTTGGAG GATGGCAAAG CTAACTCAAC 660
AGTAAAGAAC 670