EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM030-19257

Organism

Mus musculus

Tissue/cell

CH12

Coordinate

chr3:95758700-95760120

Target genes

Number: 21
Name	Ensembl ID

Ecm1	ENSMUSG00000028108
Prpf3	ENSMUSG00000015748
Mrps21	ENSMUSG00000054312
Gm129	ENSMUSG00000038550
BC028528	ENSMUSG00000038543
Aph1a	ENSMUSG00000015750
Car14	ENSMUSG00000038526
Anp32e	ENSMUSG00000015749
Plekho1	ENSMUSG00000015745
Otud7b	ENSMUSG00000038495
Mtmr11	ENSMUSG00000045934
Sv2a	ENSMUSG00000038486
Bola1	ENSMUSG00000015943
Hist2h2ac	ENSMUSG00000068855
Hist2h2be	ENSMUSG00000068854
Hist2h3c2	ENSMUSG00000081058
Hist2h2aa2	ENSMUSG00000064220
Hist2h2aa1	ENSMUSG00000063954
Hist2h3c1	ENSMUSG00000093769
Hist2h4	ENSMUSG00000091405
Hist2h3b	ENSMUSG00000074403

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr3:95758967-95758985	GAAAGGAAGAAAGGAAGT	+	7.07
FOXA1	MA0148.4	chr3:95759875-95759891	AATTGTTTACACAAGG	-	6.57
Foxd3	MA0041.1	chr3:95758948-95758960	AAACAAACAAAC	-	6.32

Enhancer Sequence

TCAGATGTAG GCATGCAAAT GAGGTGGTAA GCATAACCCA AGCACAACCA ATTTGGGTGC 60
GAGACACGCC TCTCCTAGGG CTATATAAGC AGCACCAGTT CTGGGCTTGG GGTCTCTCCG 120
CCTCTGCAAT CAAGCTCTCC CAATAAACGT GTGCAGAAGG ATCCTGTTGT AGCGTTGTTC 180
TTGTTCTTGC TGGCGAGTCG GCCACAAGAC AAGGCTATAC AGAGAAACTC TGTTTCGAAA 240
AAAAAACCAA ACAAACAAAC AAAAAAAGAA AGGAAGAAAG GAAGTTTCCA ATTTAAACCA 300
GCAGTGGTCA TTGCTCAGTG TATATTGAAG CCACATTGGA ACTGAGAGCC GAACAAGTAT 360
GCTGGTCTAA AGACTCCCAA ATGGAGCTTT TTAGATTAGA CCACAGACAG GTTAAGGGTG 420
TGTCCTTTCC CACAGATAAT TTGTGACCCA TGGTAGGTAT GGACTCAAAG ATAAAAAAAC 480
AAAACAAAAA CAAAACAGGG TTCAAATCCA GTAAGCAGAG GTAGCCCTTG GGTTTTGGAT 540
TGATCAAATA GTCCTGGAAA GCAGGAAAGG CGTCTCCAGG CTTGTACATT TCCAGACTCA 600
CTGAGCTGTG GAAAGTTTGC ACGGAGCAAG TCTCTCAGTG AGATGGGGGT GGGGGTGGCA 660
CTTGAGAGTC CTCAAGAACT ACTGGGTGCC TCCAGTTACT TTGCCCTCAT GTTTTTGGTT 720
GTGGTAAATT CATGGAACAA CTCTTATCTG GAGGTCAGAC TGTGTCAGAG AAAGACAGAA 780
GTGAGAGGAG AGGAGACTGA GAGTGAAAGA AACAGCTGCC TGAGAGGGAT GGCTGCCTGG 840
CCCTGCCAGG CCCACACAGG TCTAGTCTGG GGATGCGAAC ACGGGAGGTC CATGTGCAGG 900
GCTCGGGCCT CCAGTGGACA TGAGATGCCC TGCCCAGGTT CAGCACCAAA CTTTAGATTT 960
CTGAGTCAGT GCAAAGGCGC AGAGGTAGGG AGAGCCTGAC CTTCAACAGA TGGGCACACA 1020
GCGAGGGCAG CCCGCTCCCT TGGGAAGTTG AGAGGGTCTC CCAAGTGAAA AAGCTGGCTG 1080
CCACCCCTCA CAGGGGCATC ATGAGGGGCT TGGGAATGAG GAGATTGCTG CAGCCATAAG 1140
ATGCCATGTG TGTCTCCTGC AGTCTTTCGT TTTGAAATTG TTTACACAAG GTGAGACAGA 1200
GCACCTTAGA AGACAGGCTG TCCCAACAGA TATTCCTGAG ATCACCAATC ACAAACTGGC 1260
TGAGCGAAGG ACACCTGTAA TCTCATCAGA ACCCTGATGT ACAACCGACG TACAACTGGC 1320
AGGATGCATG GGCCATTCAC TCGCCATCAG GAGAGAGCTG GAAGTGCCCG GGGTGCACTG 1380
TGTTCAAATG CAGGAGTGAC CTTGGTAATG CTCCTGAACT 1420