EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM030-19094

Organism

Mus musculus

Tissue/cell

CH12

Coordinate

chr3:88035400-88035750

Target genes

Number: 16
Name	Ensembl ID

Hdgf	ENSMUSG00000004897
Rrnad1	ENSMUSG00000004896
Iqgap3	ENSMUSG00000028068
Mef2d	ENSMUSG00000001419
1700021C14Rik	ENSMUSG00000010538
Cct3	ENSMUSG00000001416
0610031J06Rik	ENSMUSG00000001418
Tmem79	ENSMUSG00000001420
Smg5	ENSMUSG00000001415
Paqr6	ENSMUSG00000041423
Bglap	ENSMUSG00000074489
Pmf1	ENSMUSG00000028066
Slc25a44	ENSMUSG00000050144
Sema4a	ENSMUSG00000028064
Lmna	ENSMUSG00000028063
Ssr2	ENSMUSG00000041355

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_04018	chr3:88033723-88035495	Cortex
mSE_04384	chr3:88031326-88038230	E14.5_Brain

Enhancer Sequence

GAAGTGGGAG GAACCAGGCA GGCCCTCACT TATATGCTCT CAGAGTCCCA CTGAGCATAT 60
GCAGATGAGT CTGTCTGTAT GCAGATGAGT CTGTCTATAT GCAGATGAGG AGAGAAGGCA 120
TTCTCTTCTC TGGGTTACCA TAGAGCCTGT CACCCCCTCC CTTTCCCTTT GGGTTCCAGC 180
TGCAGGGTAG CTTGGGAAAA AGGCTAGCCC CTAGGGAGGG GCAACTTACA AATAAAAGGT 240
TAGACTTCAG GAAGGACTGA CCAAAGGAAA AAACTAATCA GTCTGGGGAG GAACTAGAGA 300
TGGAAGAGAA TATAGAGAGG TTTCTGAATA GGTGAGACCA AACCATGCCC 350