EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM030-13431

Organism

Mus musculus

Tissue/cell

CH12

Coordinate

chr17:35371460-35371890

Target genes

Number: 24
Name	Ensembl ID

Ehmt2	ENSMUSG00000013787
Lsm2	ENSMUSG00000007050
Vars	ENSMUSG00000007029
Ng23	ENSMUSG00000036185
Msh5	ENSMUSG00000007035
Clic1	ENSMUSG00000007041
Ddah2	ENSMUSG00000007039
Abhd16a	ENSMUSG00000007036
Ly6g5b	ENSMUSG00000043807
Gpank1	ENSMUSG00000092417
Csnk2b	ENSMUSG00000024387
D17H6S53E	ENSMUSG00000043311
Apom	ENSMUSG00000024391
Bag6	ENSMUSG00000024392
Prrc2a	ENSMUSG00000024393
Aif1	ENSMUSG00000024397
Ltb	ENSMUSG00000024399
Tnf	ENSMUSG00000024401
Lta	ENSMUSG00000024402
Gm16181	ENSMUSG00000081650
Nfkbil1	ENSMUSG00000042419
Ddx39b	ENSMUSG00000019432
H2	ENSMUSG00000073411
Gm18733	ENSMUSG00000092444

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr17:35371545-35371557	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr17:35371549-35371561	AAACAAACAATC	-	6.92

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_00589	chr17:35309410-35373028	pro-B_Cells
mSE_01352	chr17:35301415-35412021	Th_Cells

Enhancer Sequence

TTCAATTCCG AACAACCAGA TGAAGACTCA CAACTATCCG TACTGCTACA GTGTGTACTC 60
ATATACATAA AATAAATAAA TCTTCAAACA AACAAACAAT CACACCATGC TAGCACACAC 120
CCCTTAGTTG ATTGGGCGAT GTTAGGATAA GCTTTTCTGT TACTAGAGAG ATATGGCCAC 180
ATCCCAACCA GGGATCTTCA ACAGTTCCCA AGGACCAAAG AACTAACTTA TTTCCCAACT 240
ATTTTGTTGT ATGATACAGG GTCTCTCTGT AGTCTTGGAG CTCACTGTGT AGGCTACATA 300
CTTAGAGAGA TTCTCCTGCC TCTGCTTGCC CAGAGTCAAA AGACCTGCGC CACCACACCA 360
GGCCTTTATT TCCCACGCAT TCTTTCAGTT CAGATCTGGC CAGCTTCTCA AGACCAGTTC 420
CCACGGACCC 430