EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM030-02120

Organism

Mus musculus

Tissue/cell

CH12

Coordinate

chr1:193580320-193580980

Target genes

Number: 7
Name	Ensembl ID

Ppp2r5a	ENSMUSG00000026626
Dtl	ENSMUSG00000037474
Ints7	ENSMUSG00000037461
Lpgat1	ENSMUSG00000026623
Nek2	ENSMUSG00000026622
Slc30a1	ENSMUSG00000037434
Traf5	ENSMUSG00000026637

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOXF2	MA0030.1	chr1:193580360-193580374	TAAAAGTAAACAAA	+	6.19
FOXP2	MA0593.1	chr1:193580363-193580374	AAGTAAACAAA	+	6.62
Foxj3	MA0851.1	chr1:193580360-193580377	TAAAAGTAAACAAATAT	+	6.96
SPI1	MA0080.4	chr1:193580604-193580618	CACTTCCTCTTTCC	-	6.1

Enhancer Sequence

TGTGGTAAGA AGATATCTTA GTTACCAGTA GAGAGGCTAT TAAAAGTAAA CAAATATAGT 60
AATAGTCATA GGAAGTGATG AGGGAATTCA TAGAAATACA AATAAGTACA TCAGATCCAG 120
AAAATGTTGA GGAGAATATA ATGTTTGGTA TATGGATCAA ATGCCTGGAG ATGAGTTGGA 180
AAGGGATGTA AGCTCAAGGA ATAGTCTCTC ATAGGCAAGA GAATAGTAAC TTCTTCCCCA 240
GTCAGCTCTG CATGGCCGCA CTCTCACTTC CACTGAGTAT CACACACTTC CTCTTTCCAC 300
GCGGGGAAAT AGCATATGTA AGCATGTCTG TGGATGGCAG GGCCATGGTT ACTTGATGTT 360
CATGTATTTA GCAACTTTAA TCTTGATTGT ATGGTCCTGT GCACAGAAGT TCTTAATGAA 420
TACCTGATAG ATCAAATGGA TCTTGTTCTG AGGACCCACA AATTAAGACT TAGGAAGTAA 480
GTAGAAAGCC CAGAAGCAAG CAACAGAGAG ATCAACAGCT AAGGAGGGAG GGTCCAGTGG 540
GAAAGCTAGC CAATCCTCTT AGATGGGGAA GTCTGAGGAA ATGACTGGTG TAGGGTAATG 600
TAACCATTGA TGTTGATGGT AAGCATCAAG AAGTTACATT CTCAGTGTGC TCTAAAGTGT 660