EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM030-00869

Organism

Mus musculus

Tissue/cell

CH12

Coordinate

chr1:87583540-87584550

Target genes

Number: 7
Name	Ensembl ID

Sp110	ENSMUSG00000070034
Sp140	ENSMUSG00000070031
Sp100	ENSMUSG00000026222
A630001G21Rik	ENSMUSG00000052760
Cab39	ENSMUSG00000036707
Itm2c	ENSMUSG00000026223
Gpr55	ENSMUSG00000049608

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

MIXL1	MA0662.1	chr1:87583715-87583725	TCTAATTAAC	+	6.02
REST	MA0138.2	chr1:87583600-87583621	GCCTCTGCCCAAGGTCCTGAT	-	6.9

Enhancer Sequence

CCAGCCACAA CCTAGCTGTC CTTAAAAACA TAAGTCTGTT TTGTAAACAC AGTGCCCGGG 60
GCCTCTGCCC AAGGTCCTGA TGTTTTTAGC CTTCTTCACT CCTGATGTCT CCCACAATGA 120
CAGAGTCAGT GTTTCTGAAA CCAAGCCCAT CATCTGGGTC ACCACTGTTT CTAGATCTAA 180
TTAACTAAAT CTGCACGTTT GAGATGATCA CAATCATTTA GGAGTGGCAG GTATGAAGTG 240
AAGAACCACA AAAGGGAAAT GTATCTCAGA GGTAGAGCCA TCCTTTGATA TAGACACGTT 300
GAGTGTCACT AATGTTTGGG AGTCTTTGGA GGGGGCAAAA TAAAAATTCC TTGCAAAGGG 360
CAGTTAGAAG CAGAACTAGA AGTGGCATGT GTTTGGGTCC CATGCGAGTC CCAAAAGGTA 420
TGCTGAAAGG CTAGATTGGA AACTGACAAG CATCTAACAG GGTGGACGAG TCTGCCTCAG 480
GGTCTTAGAA TAAAGGTGGC TTATAAATAG CAGGCACTGT GGCATGTGAC CGTGGTTCAA 540
AAAGAAAATC AGACTGGCTT AGCAGGAAGT GAGGGCACAG TCTCCCAGCT ACAGGATGTT 600
AGAAACCTGA AACCAACCCC CACTTCCTGC TGTAGTCAGT TGTGAGCACT TTGTATCGAG 660
GACCAGGCCC CGTGAGTTCA GATCCCAAGA CCAGTGTAAA AAGCTGAAAA CCATGGTGCA 720
CACTTGCAAC CCTAGGGATG GGAGCAGAAA CAGCAAGATC CTGTGAGCTC ACCAGCTAGT 780
CAGTGCAATT GCAAGCTCCA GGCTCAGCTG AGAGACCTTG TGGCATAAAG TAAATCATAT 840
GAAGAGCAAG AGAGGAGGAT ACCTGAGACA GACACATACA CGCATGTACA TGCACACACA 900
CATACACACA TGTACATGCA CACACACATT CACACATACA ATGCCCCCAG GCTTTCCCAG 960
CAGTAATGCA AATTGCCGTA ATACTTGTGA CTTTTCTTTA TACTTTACAG 1010