EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM030-00491

Organism

Mus musculus

Tissue/cell

CH12

Coordinate

chr1:58853690-58855060

Target genes

Number: 8
Name	Ensembl ID

Orc2	ENSMUSG00000026037
Fam126b	ENSMUSG00000038174
Ndufb3	ENSMUSG00000026032
Gm10068	ENSMUSG00000059647
Cflar	ENSMUSG00000026031
Casp8	ENSMUSG00000026029
Trak2	ENSMUSG00000026028
Stradb	ENSMUSG00000026027

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

DUX4	MA0468.1	chr1:58853794-58853805	TGATTGAATTA	-	6.14
Foxd3	MA0041.1	chr1:58854897-58854909	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr1:58854901-58854913	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr1:58854947-58854959	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr1:58854951-58854963	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr1:58854955-58854967	GTTTGTTTGTTT	+	6.32

Enhancer Sequence

GGTGCTGGAA ACTGAACCCA GGTGGTCTGC AAGAGCATTG AGTGCTCTTA AACTCCTGAG 60
TTGTCTCATC GACAAATCTT TCTTTTTTTA AATAAATATG GCATTGATTG AATTAGCATG 120
AGGACGATTA GTGCTCCCGT TTCTTACAAA CCTATTTAAA GAAGACTCAA GAACTCGTAT 180
GTGGACACAG AGGAGTTGCT GGTCATGGCT GTGTGTCTCC CATGTCTCTT TCCCAGGAGG 240
GAGAAAGGTG ACCCCATAGC AGGCCATTTA GCTGTTATTT GATTTTGCCC AGTAATTTCT 300
GTTTGTGGGT AGGTTCACTC CAGGAACTAA TATGATTTCT CCAGCAGCCT GCATAGCCTG 360
ACCACCTCAC CCTATCAGGT TGCTCTTTTT TCTTTTTCTT TTCTTTTCTT TCTTTCTTTT 420
TTTTTAATCT TCCAACTTAA AAGAAATTCT AATAAGAAAG TGGGCATCTT CTTGCTTTAT 480
TTGACATTCC TCGGATTTAC TGACCCATGT GATGTGTCAT CCTATGCTCT CATGGGCTTA 540
GTGCCTATAG GGGAGCTCCA TGTGTTTTTT CCAGCAAGAC CACACCCCCA TTGCCCCTGT 600
ACAGAGGTTC ATTGCCTCTT TACACAGTAT CTTCTCATTG ATGATTTTCA GGCTGTTGTT 660
ATGTGGTTCA AGTATTACCA TGAGAGCTTC AGTTGCTGCA CTCACAGGAA GTTCGTGGTC 720
TCTGACAGGA AATTCTCAGA AAACAGTGAG CCAGAACTGG GGTAGAGGTT ATAGAGGATG 780
CTGGGAAAAC TATAGTAACT CCTGGAGTGG ACTGGGCCAC AGACAGGATT TGATTTTGCT 840
GCTTCCATGG TGCCCAGGTT CCTGGGCAGA ATCAAATGCC AGCTAAAGGT CCTGGTACGA 900
TGGTGTCACC TTTGCCCAGA CATCGAGGGT GGACATATGC TTTTGGGCGC CTCATTCAGT 960
TCCCTCAGCT GTGAAGTTGG CGCTCTTTAC TCTGAAAGTT TACATTCTAT TTTAGGTAGC 1020
AGAAAACACA GTTTCAAAGT CCTTTTCTTT TTCTTCTCTT TAACACCAGA AAATATTTTA 1080
ACTAATTCCC AGCAAGGAGC TTATGTGTTT GTACACAGGT TTGCTCACAC AATGAAGGAC 1140
CCAGGGTTTG CCTCTTTGGG GAGTTTGCTG TAGGAAAGCC CTGATTTTGA CTTTAGGCTT 1200
ATTTTTTGTT TGTTTGTTTG TTTGGTTGGT TGGTTGGTTG GTTTTTTTTG TTTTTTTGTT 1260
TGTTTGTTTG TTTGTTTTGT TTTGTTTTGT TCTGTTTTAG CTGTAAGTAG AAACTATCGA 1320
ACTAGGAGCA AGGAGAACAT CCCTGTGTAA CAGTAAGACT TAGCTGTGGA 1370