EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM029-39480

Organism

Mus musculus

Tissue/cell

Cerebellum_neonate

Coordinate

chr9:44214240-44214880

Target genes

Number: 17
Name	Ensembl ID

Thy1	ENSMUSG00000032011
Mcam	ENSMUSG00000032135
Cbl	ENSMUSG00000034342
Nlrx1	ENSMUSG00000032109
Abcg4	ENSMUSG00000032131
Hinfp	ENSMUSG00000032119
C2cd2l	ENSMUSG00000032120
Dpagt1	ENSMUSG00000032123
H2afx	ENSMUSG00000049932
Hmbs	ENSMUSG00000032126
Gm10080	ENSMUSG00000060467
Hyou1	ENSMUSG00000032115
Slc37a4	ENSMUSG00000032114
Trappc4	ENSMUSG00000032112
Rps25	ENSMUSG00000009927
Ccdc84	ENSMUSG00000043923
Ddx6	ENSMUSG00000032097

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr2f6(var.2)	MA0728.1	chr9:44214677-44214692	AGGGTCAAGAGGACA	+	6.3
PHOX2A	MA0713.1	chr9:44214263-44214274	TAATTTAATTA	+	6.62
PROP1	MA0715.1	chr9:44214263-44214274	TAATTTAATTA	-	6.32
PROP1	MA0715.1	chr9:44214263-44214274	TAATTTAATTA	+	6.62
Phox2b	MA0681.1	chr9:44214263-44214274	TAATTTAATTA	+	6.62
Rarb	MA0857.1	chr9:44214676-44214692	TAGGGTCAAGAGGACA	+	6.21

Enhancer Sequence

CAGAAAGAAT TTCAATGTCC ACTTAATTTA ATTATCTAAT TAAGTGGTGG TGGTGGTGAT 60
TGGCACACGC CTTTAAACCC AGCGCTTGGA AGGCAGAGAG AAGTGGATCT CTGAGTTTGA 120
GGCTAGGCTG GTCTACAGAG TGAGTTCCAA GACAACCTAG TCTTCCACTA GCAGCCTTTG 180
GATTAAGACA TAGAACTCTC AGCTCCTCCT GCGTCATGCC TGCCTGGATA CTGCCATGCT 240
CTCACCTTGA TGATAATGGA CTGAACCTCT GAACCTGTAA GCCAGCCCCA ATTAAATGTT 300
TTTTATAAGA CTTGCCTTGG TCATGGTGTC TGTTCACAGC AGTAAAACCC TAATACAGAA 360
GTTGAAGAGA AACCCTATCC CCCCCAAATT TTTTTTTTTC AAAAATTCAA TTACCTTATG 420
TTAATGATGA AGAAACTAGG GTCAAGAGGA CAAGACCTGA CTGGGCAAAA ATCAAACTAC 480
CTCAAACCTG GCTATAGTTG ACATTTCTTC ATAAAAAGAG TTCAGCCACT TAAAGAGGTA 540
CACAGTAATT GTACCTCTTT AAGTACACAA AGAAACACTT TAGCCGGCCT AGAGACAGAT 600
GCACTAGTCA GGGGAGGAAA TGTTTAAAAG GGGTAGGGAA 640