EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM029-38041

Organism

Mus musculus

Tissue/cell

Cerebellum_neonate

Coordinate

chr8:107970150-107972170

Target genes

Number: 29
Name	Ensembl ID

Cbfb	ENSMUSG00000031885
D230025D16Rik	ENSMUSG00000031889
B3gnt9	ENSMUSG00000069920
Tradd	ENSMUSG00000031887
Fbxl8	ENSMUSG00000033313
Hsf4	ENSMUSG00000033249
Nol3	ENSMUSG00000014776
4931428F04Rik	ENSMUSG00000014837
Exoc3l	ENSMUSG00000043251
E2f4	ENSMUSG00000014859
Elmo3	ENSMUSG00000014791
Lrrc29	ENSMUSG00000041679
Tmem208	ENSMUSG00000014856
Fhod1	ENSMUSG00000014778
Slc9a5	ENSMUSG00000014786
Plekhg4	ENSMUSG00000014782
Tppp3	ENSMUSG00000014846
Zdhhc1	ENSMUSG00000039199
Hsd11b2	ENSMUSG00000031891
Atp6v0d1	ENSMUSG00000013160
Agrp	ENSMUSG00000005705
Gm8841	ENSMUSG00000091957
Ctcf	ENSMUSG00000005698
Gm5915	ENSMUSG00000080021
Acd	ENSMUSG00000038000
Pard6a	ENSMUSG00000005699
E130303B06Rik	ENSMUSG00000013155
4933405L10Rik	ENSMUSG00000013158
Thap11	ENSMUSG00000036442

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EBF1	MA0154.3	chr8:107970257-107970271	TTTCCCCAGGGACT	+	6.11
IRF1	MA0050.2	chr8:107970654-107970675	TCTTTCTTTCTTTTTTTTTTT	+	6.25
IRF1	MA0050.2	chr8:107970672-107970693	TTTTGGTTTTGGTTTTTTTTT	+	6
Nr5a2	MA0505.1	chr8:107971775-107971790	GCTGGCCTTGAACTC	-	8.25
ZNF263	MA0528.1	chr8:107971156-107971177	CCTCCCCCACCCCCCGCCTCC	-	6.54
ZNF263	MA0528.1	chr8:107971149-107971170	TCTCCCCCCTCCCCCACCCCC	-	6.95

Enhancer Sequence

AAGATGGTAA ATATTTTGCT CATTGGGTAT CCAGAGAGAT CTGGATGGGA TAAGATTTAC 60
AAGATGACCC GGCAGCGCTC CATCTTCTGG TCAGCTGACC CTTCTGCTTT CCCCAGGGAC 120
TGGCTCAGAG CTTACCATCT GGGAGGCTTT TCTGCTTGAA GAGTGACTGT TTCCTTCTAC 180
ACCGTTTCTC TTTCTTCTCC TGCTTTCCTC CAAATGACAA TATGGTCATT TAGGAAACTA 240
TCTCCGTTAC CATTTCTTTT CTTTTCTTTT CTTCTTTTTT CTTTTTGCTC ATTGGGATTA 300
AACCCCACAA GATTTCTTTA ATGCAATTTC CATTTAGATT TATCTTTGTT TTTATTTCTT 360
TCTTTAGCCC AGGCATCCAA TCCCTTCTGA GATCATTTCC TCCAGCTTAT AGTGCATCCT 420
TCGGTGTGGC CTGTTGGTGA TGAACTCTCT GTTCTGTTTG TTGGCTTAAT GCTTCCCCTT 480
CACCATTATT CTTTTTTTTT TCTTTCTTTC TTTCTTTTTT TTTTTTGGTT TTGGTTTTTT 540
TTTTGTTTTG TTTTGTTTTG TTTTGTTTTG GTTTGGTTTG GTTTGGTTTG GTTTTGGTGG 600
TTTTGGTGTT TTTTTTTTTT TTTTTGGTTT TTTTTTTTTT TTTTTTTGGT TTTTTTGAGG 660
CAGGGTTTCT CTGTGTGGCC CTAGCTGTCC TGGAGCTCAC TTTGTAGACC AGGCTGGCCT 720
CGAACTCAGA AATCTGCCTG CCTCTGCCTC CCAAGTGCTG GGACTAAAGG CGTGCACCAC 780
CGCTACCCAG CTCACCATTA TTCTTGAAGG GGATTTTGGG TGAGGGTAGG GTTCTATATT 840
GCGGGATGCT TCTTTCAGAA CGGTGCCTTA TTCCACTGGA TCACTGGTGT CTATTACTCA 900
TGAACTGAAC TCATTAGTTC TGAAAAATAT AACTATGGTT TATACACTCT TCTTATTCTT 960
CTGGAACTCT TAATTAAACA AATATATCAC AGTTTGTTCT CTCCCCCCTC CCCCACCCCC 1020
CGCCTCCAAA GTGGTGGTTT CAAGACAGAA TCTCACTGGC TGTCCTGGAA CTCACTATGT 1080
AGATCAGACT GGCCTCTAAC TTACAGAGAT CCTCCTACCT CTGCCTTTGT GCTGGGAGTA 1140
GATGTGTATT CCACTGTGCC CAGCTAATTT ATTTATCTCT TGTTCTTTTA TATTTTTCAT 1200
CTTTTTTGTT TGTTTGATTG ATTAACACTT TGAATAATCC TTCTGGTTCA CCTTTCTTTG 1260
TTGTTGTTGT TGGGTTTTGT TCTGTTTTGT TTTTTGTTTT TTGTTTTTTG TTTTTTGTTT 1320
TTTGAGGCAG GGTTTCTCTG TGTAGCCCTG ACTGTCCTGG AACTCACTCT GTAGTCAAGG 1380
CTGGTCTGGA ACTCAGAGAT CCACCTGCCT CTGCCTCCTG AGTGCTGGCA TTAAAGACGT 1440
GGGCCACCAC TGCACAAAAA GTCCACCTTT CATCTTATTA ACATTTTCCT TAGCTATGTT 1500
TCCGCTATTA AAACTGTGGG CTAAAATCTT TTTTTGTTGT TGTTTGGTTT GGTTTGGTTT 1560
GGTTTTTTCG AGACAGGGTT TTTCTGTATA GCCCCAGCTG TCCTGGAACT CACTCTGTAG 1620
ACCAGGCTGG CCTTGAACTC AGAAATCTGC CTGCCTCTGC CTCCCAAGTG CTGGGATTAA 1680
AGGCGTAAGC CACCACTGTC CGGCTTAAAT TCTTAATTCC AAATATTTTT CTTCTTTGTT 1740
TAGTATGTTT GATTTGGTCT GGGTCACTTT TTCTAAGGAA AATGTAAGCT TTTTTTTTTT 1800
TTAATATTTC CGTAATCAGA ATAAACATAG GTGTCTGATA GCTATATGGC ATATATTATT 1860
TTATAACATC AGACCTTTGG AAGTCTTTTT TTTTTCTACT GGTTTTCATT CATGTTAATA 1920
CTTTGGTTTT TGTTTGTTTG GACTGTTTGC TTACTCTTAT ATTTGAGTAA CTATATGAAC 1980
GGTATTATTA GTCTTATATG TGTTTGTCTT TTTCAGAACA 2020