EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM029-34914

Organism

Mus musculus

Tissue/cell

Cerebellum_neonate

Coordinate

chr7:53372780-53373330

Target genes

Number: 12
Name	Ensembl ID

Lmtk3	ENSMUSG00000062044
Cyth2	ENSMUSG00000003269
Grwd1	ENSMUSG00000053801
Grin2d	ENSMUSG00000002771
Kdelr1	ENSMUSG00000002778
Tmem143	ENSMUSG00000002781
Emp3	ENSMUSG00000040212
Ccdc114	ENSMUSG00000040189
Nomo1	ENSMUSG00000030835
Abcc8	ENSMUSG00000040136
Myod1	ENSMUSG00000009471
Kcnc1	ENSMUSG00000058975

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RARA(var.2)	MA0730.1	chr7:53372834-53372851	AGGTCAACCAGGGGACA	+	6.16
Rarb(var.2)	MA0858.1	chr7:53372834-53372851	AGGTCAACCAGGGGACA	+	6.09

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_07128

chr7:53370908-53372915

Heart

Enhancer Sequence

CCTCTGCAGG TCGCAAGAAA CCACCCTGAA GCTTCACAGA TCACAACCCT CTGAAGGTCA 60
ACCAGGGGAC ATCTCATTCC CACTTACAGA TGGGAAAACA TAGAGAGAAA GAAGACGCTT 120
AATCAAACCA CACTACTCGA CCATGTCCAG AACCCCCGGG GCTTCAGTTT CTCTCTGTGT 180
GATGGCTAAT ACTGTCAACT AGAATCACCC ATAAGGCAAA CCTCTGGGCA AACAGAGAGG 240
GGGGTTATCT ACAATAGGCT ACTTAAGGTG GGCAGACCTG CCCACTGTGG GCGGCGCCAT 300
ACCTTAAGCT GGGGTCCTAA ACTGAAAAAA AAAAAAAAAA AAGGAAAAAG TGGGCTGAAC 360
ATTCATGGCC CTCTGCTTCT TGAGGACACA ATGTGACCGT CTCCGGTCAC CATGCCTTCC 420
ATGCCACCAT CAGACCATAT CCCTGCAAAC CCACACAGAC CTTTCCTAAG CTAGCTTCTT 480
GTCAGTAGTT TGACCTAGCA AAAGGAAAGC AACTAGCATA TCGTTGGTGT TAACTGCGCC 540
CCCAGGCTGG 550