EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM029-21345

Organism

Mus musculus

Tissue/cell

Cerebellum_neonate

Coordinate

chr2:29642320-29643020

Target genes

Number: 8
Name	Ensembl ID

Gm13420	ENSMUSG00000079497
Gm13547	ENSMUSG00000075425
Trub2	ENSMUSG00000039826
Urm1	ENSMUSG00000069020
Cercam	ENSMUSG00000039787
Odf2	ENSMUSG00000026790
Gle1	ENSMUSG00000019715
Set	ENSMUSG00000054766

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr2:29642915-29642927	AAACAAACAAAC	-	6.32
PAX5	MA0014.3	chr2:29642659-29642671	GTGGTCACGCTT	-	6.32
USF1	MA0093.2	chr2:29642954-29642965	ACCACGTGACC	+	6.32
USF2	MA0526.2	chr2:29642952-29642968	GAACCACGTGACCTCA	-	6.42

Enhancer Sequence

AGAGTTATTT CCAGGGCAGC CAGGGGTATA CAGAGAAACC ATTCTCTAAA AAGTGAAGAA 60
CAAACAAACA AAACAAAAAT CCTAGGTTGG AAGTGTAGCT CAATTCATGG AGTGTTTGCA 120
CAATACGCAA GACGCCCCGG GTTCCATCCC CAGCACCCTA ATGGGAGGTG GTACTACACA 180
GATGTAGTCT AAGACCTTGG GTAGTGAAGG CAGGACAGTC AAAAGTTCAA GGTTATCTTC 240
ATCTTACATA GCAAATTTGA GGCTACATGA CAGTTTTTAA GAAAATAAAA GAAAGGAAAA 300
AAAGGCAAAG AAAAAAATTG GTGTTTGAGG GTCGGGGTGG TGGTCACGCT TGTGATCCCA 360
GCATCTGGCA GGTGGAGTCA GGAGAGTCAG AATTCTCAGT GCCTCACTGA TTTCAAGGTC 420
GGATTAATTA GAAAAGACCC TGTCTCAAAA GGCAAAAAAA AAAAAAAAAA AAAAAAAAGT 480
TCAAATTCTA ACTCTGTAAC AGAAACCGCG AAAAAAAACC CAACACTATA GAATGAATTT 540
CTCTAAAGGA AAATAGCGGA GAGTGGGTAG TAACGAAATG TGTACAAGAG AAAAAAAACA 600
AACAAACAAG AAACAGCTAC AACCCGGCAA ACGAACCACG TGACCTCACT CCACATCAGA 660
AAGAACTAAA GCAAAACCGT GGGTCCGCGT CGGAGTTCTC 700