EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM029-04334

Organism

Mus musculus

Tissue/cell

Cerebellum_neonate

Coordinate

chr10:126696960-126699820

Target genes

Number: 23
Name	Ensembl ID

Ctdsp2	ENSMUSG00000078429
Tsfm	ENSMUSG00000040521
Mettl1	ENSMUSG00000006732
March9	ENSMUSG00000040502
Cdk4	ENSMUSG00000006728
Tspan31	ENSMUSG00000006736
Agap2	ENSMUSG00000025422
Os9	ENSMUSG00000040462
B4galnt1	ENSMUSG00000006731
Slc26a10	ENSMUSG00000040441
Arhgef25	ENSMUSG00000019467
Dtx3	ENSMUSG00000040415
Pip4k2c	ENSMUSG00000025417
Kif5a	ENSMUSG00000074657
Dctn2	ENSMUSG00000025410
Mbd6	ENSMUSG00000025409
Mars	ENSMUSG00000040354
Arhgap9	ENSMUSG00000040345
Gli1	ENSMUSG00000025407
R3hdm2	ENSMUSG00000025404
Ndufa4l2	ENSMUSG00000040280
Shmt2	ENSMUSG00000025403
Nxph4	ENSMUSG00000040258

TF binding sites/motifs

Number: 13

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Esrra	MA0592.2	chr10:126698897-126698908	ATGACCTTGAG	-	6.02
Esrrg	MA0643.1	chr10:126698897-126698907	ATGACCTTGA	-	6.02
Klf1	MA0493.1	chr10:126699651-126699662	GGCCACACCCA	+	6.62
Nkx2-5(var.2)	MA0503.1	chr10:126698587-126698598	AGGCACTCAAG	+	6.14
RREB1	MA0073.1	chr10:126697724-126697744	CTCCCCCCCACCCCCACACA	+	6.11
RREB1	MA0073.1	chr10:126697734-126697754	CCCCCACACACACACACAGA	+	6.49
STAT1	MA0137.3	chr10:126699275-126699286	TTTCCCAGAAA	-	6.02
STAT3	MA0144.2	chr10:126699275-126699286	TTTCCCAGAAA	-	6.32
ZNF263	MA0528.1	chr10:126697445-126697466	GAGGGAGCAGAGGAGAGGGGA	+	6.01
ZNF263	MA0528.1	chr10:126697477-126697498	GAGGGAGCAGAGGAGAGGGGA	+	6.01
ZNF263	MA0528.1	chr10:126697509-126697530	GAGGGAGCAGAGGAGAGGGGA	+	6.01
ZNF263	MA0528.1	chr10:126697541-126697562	GAGGGAGCAGAGGAGAGGGGA	+	6.01
ZNF263	MA0528.1	chr10:126697573-126697594	GAGGGAGCAGAGGAGAGGGGA	+	6.01

Enhancer Sequence

TCCAGGACAG CCAGGGCTAC ACAGAGAAAC CCTGTTTCAA AACACCCAAA AGCAGAATTC 60
ATTTATCTTT TGGGAGACCT GAGGAAAGAA GCTTTGGACA GCTGAAAAGG GGGGTGGGGG 120
AAAGATTGAC TTTGATTGAT TTCTTGCTGT TCCCCTCCCC CACATCTGGC ACGGATGCAG 180
TGGTCCAGGC TGGAACAAAG ATGAGCCCAG TGAAAACGTC AGACCGGATT CTAAGTGTAA 240
AAGAGCAAAC CAAGACAACA GCTCACACAC ACTGTGTCCC ACCAGCCTTC TTCTGTGACA 300
AGGACTGCTG ACTTTGTCAA ATCCCACTCC TTACACTTCA GAAAGAGATG AGGCCTACAG 360
AGCTGTCTCT CCATCTTGCT GTTCTACCCT CTGCAAGCAG AATGCAGCCC AGCAACAGAA 420
GGGCCTCTGA AGCCTAGAGC AACTAACTAA CTGCAGGGCT TCGAGGAGAA GGGAGCACAT 480
CACAGGAGGG AGCAGAGGAG AGGGGAGCAC GTCACAGGAG GGAGCAGAGG AGAGGGGAGC 540
ACATCACAGG AGGGAGCAGA GGAGAGGGGA GCACGTCACA GGAGGGAGCA GAGGAGAGGG 600
GAGCACATCA CAGGAGGGAG CAGAGGAGAG GGGAGCACGT CACAGGAGGG AGCAGGGCTG 660
CTGGCTCTGG GGAGTTGTCC TCTCCTACTC AATCCCAGTG TGTCCTCCCT CATCTACCCA 720
GACATTCCAA AGCGGCTTCT TCCACTCCTC AGTAGGCAGG TTCCCTCCCC CCCACCCCCA 780
CACACACACA CAGAGCTGGA GTAGAAAACA GGGAGAGGTG AGAGGTAGTT GCCGTGACTC 840
TACTGGAGTC TTCAAGGACC TCCCCAAAAT ACCGAGGCCA TCCTTTGACT GAGTGAAGAA 900
CGGACTTCCA GAATGCAGGC AGCTCTAAGG ATGTTGCCCG AGACAAAATG GCCCCTATAA 960
GAACTTACAT CTGGAGTAAG AGACTAACAG GAGGCCTTGG GCAAGGGAAG ATTCAGACTG 1020
AGTTATAGCC CCACAAGGAT TGGCAGAACA GATATGAGGA GATCAGCTAT GGAGCTGAGA 1080
CAGAAGCTGT GTTACCAGGG AGCCATGGGT TTCTTTTCAC CCTCCCCCCT TCCCTGGTGT 1140
GTCACAGGCC AGGACCCATC CCACACCAGG ATGACCCACA GAGCCTAAAA GGAGTCCGTC 1200
TCCATAGAGT GGATAAATCT GGAACAGAGA CGTTAGCTTT AAAGTCCACC CGAGTGGATT 1260
GGCTTCCCAT GGCTACTCTC TCCTGGTTTT CAGTCTTTAT AACTTGAAGG GGCCTCAAGT 1320
TGCAAATTCT CCACTTAAAG CCAGCCAGCC AGGTTACTCA GAGAGAGGTG GGGTCCCTGG 1380
GGTTGATAGG GACTGTATTT TAACCTGGCC ACACTGACCA AACAGCAAAG ACCCTCGGGC 1440
AAAACAGAGA TACTCTCTTG TGGCAAAGAC ACACACACTA CAAAAACCAC CCACCGAGTT 1500
CACTCTGTGA AACTAGGACA GGCTAGAGGT AGGAGCTTGG AGCTTCTCCT AGACACGATT 1560
ACATTGCCTA ACTCAGAAGG TGCAGGTGTC CCCTCTCTGG TTGCTTTATG CCAAGCACTG 1620
TGGACCAAGG CACTCAAGAA TCATCCTGAC CTTGACAACT GCCTTCATAG CTGCTCCTCC 1680
CATCTGATAC TAACAACAAC TTCTTGGCTC AATACCCCCA AAGTCCTACA GAACTGGACC 1740
TCAGATCCTC TTACCCTGAA AGTCCTTAAC ACCCTAAGAA AGGTGGAAGG AGCAAGACCG 1800
AGCGGCCCTT CAGACCATCA CAATGGCCTG GAATGGAAAT CTGGGGAGGT GGGGTGGCAT 1860
AAAGGAAAAC CATGTGGGTT TTGGAGTCAC AGACTCAAGT TCAGTTCTGT AGACTAGCAG 1920
ATCTACGGAG TCTCGGCATG ACCTTGAGAA AGTCATTCAA CTTCCTTGAA CCTCAATCTC 1980
CTCGTCTGCA AAACGGAAGT ATGAACACTG CTTACTGCAA TCTTGAGACT TCAGTCCTAA 2040
GCACAGAACA CCAAGTGCAC AGAAAGCATT AATTCGCCTG ACGATCTCCT TGGGAGAGGG 2100
CTGCCATGAC GAGGTAGCAC TCATACTACC TTGTATTGGA TCTTCAAGAC TAAGATGAAT 2160
AAGCAAGTAT GTACAAACTC AGGATTTGGG CACTTTGACT TGGGAGGGCT TAGGATCTGA 2220
AATCATCTTG ATACTACACT CGGGATAGAA AGGCACACAG GCCCTTAGGA TCCTAGAGGC 2280
TAACTCTCCA ATTGGGTGTG GCATCTGTGT ACAGCTTTCC CAGAAAACCC TTCACCAGAT 2340
TTCTGCTCCC TCCCCCCAAG TCCAGGCAGC AACTACTAAA GGCGATGATG GAAGGGCCCG 2400
TCCTAGAACC CACTCCCATT CATTCCTCCA CAGAGGCCCT AGACTTCTCA TTTCCTATCA 2460
AGCCCATCCA CTAACCTTCC CCTCCCTTCG TGGAGGTTAG GGTAGAGATG AGAGTCAATA 2520
ACAAAGGGAA AACGCGCTTT CTCTAGGGGA GAGGGAAAAC ATCACAAAGG CAGGGAACTG 2580
GCTCTAAGGG GTGGGAACAT TGCAAGAGAG TAGCAAAGAC AAGTTGGGGT TCCTGATGAC 2640
GGGAAAGGAG CCCCCTCCCA CTCTGCAGAG ACTTGGCTGC AGGCCTAGGC AGGCCACACC 2700
CAGCCATCCT GATGCAGGGG AGAGGAGGGG CTGCGGCGGA GAGGATGGAG GCTGAGCATC 2760
CCTGAGCTGC TGCAGGATGA CAGGCAGAGG GACTAAGTCT TGGGGGTGAA AAGATTTTTG 2820
CATCCCGCCC CCTCCTCTAA TTTCCTTCGG ATGTAGCACT 2860