EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM029-02276

Organism

Mus musculus

Tissue/cell

Cerebellum_neonate

Coordinate

chr1:193894510-193895470

Target genes

Number: 4
Name	Ensembl ID

Lpgat1	ENSMUSG00000026623
Rd3	ENSMUSG00000049353
Traf5	ENSMUSG00000026637
Rcor3	ENSMUSG00000037395

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

REST	MA0138.2	chr1:193895275-193895296	ACTCCTCTCCAAGGTGCTGGT	-	6.65
SPIC	MA0687.1	chr1:193894823-193894837	GACTTCCCCTTTCT	-	6.23

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_12112

chr1:193893894-193894908

Spleen

Enhancer Sequence

GCCATTCTGG GGAGTCAGAT GGGACACTTC AGTGTAAAAT AACCACCCAG ACAACAGCAG 60
CCACCATACA TGGGTCATAA TTTGTAATCA GTACAACCAT TATGTCAGAA CTTTAACAAC 120
TTCCTGCCAC AGGGGGCTGC CTGCCAGGGT GCAGATGGTT TCTAGCAAGA CTGTGTGATG 180
GCCCCTCCTC TGCATTTAGA ATCACCTTGA AGATGTCTCC AAGGGGAGTA GCTGAGAGGG 240
AAGGATCCAT CCTTACTGTG GGCTGCAGCA CCATCTGTGG CCGAATAAAA AAGGACAAAG 300
CCAGCTGAGT GTGGACTTCC CCTTTCTTTG CTTCCAAATC CATGGAGGGA GATGTGAACA 360
AGCAGCTGTA GGCTCCCACC ATCTTAGCCA CGCCTATCCA CTGCTCTGCC TTGCTGGCCA 420
CTACGTGCTG TATTCCCTCA AACTACAGGC CAAATGACAG TATTCTCCCT GGAGTTGTTT 480
CTTATCAGGT GTTGGGGCAA AGCAATGAGG AACATTACAA ATACACTTTA CCAGAACAGA 540
CTTTGTCTAT TGGCTTTTCA CAGGACCCCA AACAGTCCAG TCAGTTAACT GCACTATAGG 600
CAAGCATTTA GATTGTGTTT CCAGGACTGA GAGAATCTGA GACCTCTCAG GAGAGTCTTA 660
CACGGTGCAT TTCCTGCTGC CCATCTCAAT CTCTCCCTCT CCACCTCTCT ACCCACCTCC 720
GCAGATATTA AATGTTAATA TCTCCACGGA GTCCTCTGCT GAGAAACTCC TCTCCAAGGT 780
GCTGGTGTCT GGAGGTGAGG CATTTGAGGG GATGAAGTCC CTGTCTGTGA GATTAGTGCC 840
CTCATAGAGA GCGTCCAAAA TCCCCCTCTC CTGTTTTCTT CCTGCAACAA TGCAAGGAGA 900
GCCTCACTGG AGTCTGACCA TGCTGTAAGT GCTGGCACCC TATCTCGATG CCCAGTCCTC 960