EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM029-01973

Organism

Mus musculus

Tissue/cell

Cerebellum_neonate

Coordinate

chr1:174216520-174216950

Target genes

Number: 16
Name	Ensembl ID

Vangl2	ENSMUSG00000026556
Nhlh1	ENSMUSG00000051251
Copa	ENSMUSG00000026553
Ncstn	ENSMUSG00000003458
Pex19	ENSMUSG00000003464
Gm10171	ENSMUSG00000089803
Dcaf8	ENSMUSG00000026554
Pea15a	ENSMUSG00000013698
Atp1a4	ENSMUSG00000007107
Igsf8	ENSMUSG00000038034
Atp1a2	ENSMUSG00000007097
Kcnj9	ENSMUSG00000038026
Kcnj10	ENSMUSG00000044708
Pigm	ENSMUSG00000050229
Igsf9	ENSMUSG00000037995
Tagln2	ENSMUSG00000026547

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

PKNOX1	MA0782.1	chr1:174216568-174216580	TGACAGGTGTCT	+	6.44
PKNOX2	MA0783.1	chr1:174216568-174216580	TGACAGGTGTCT	+	6.07

Enhancer Sequence

GGCACACCTG GCAGACAGAG AGGAGAATTA AAAGGGCCAA GTCGAGAGTG ACAGGTGTCT 60
ATGATTCTTT CCCATTCGGA AGCTCTAATC CTTTTCTATT AATCCCACTC ACAAAAGACT 120
GGGTGGGACC TAGCAGGAAA TAGCGACAGT TCAACTTTAG GCATCTTAAA TAGGTTCTTA 180
GGCCGTATCT GTGGTAAACG CCCGGAAGAA AGTTCATGAT ATCTGACTCC AGAGCAGGTA 240
CAAAGATGTG GCAACCACCC ACATGAAAGG GACAACAGAA ACTATGGATG AAAATGGGTT 300
CCTCTGAGGG CAGCAAGGAG AAAAGCTGGG GCTAGGGCTT GACAGTCACT GAGCTGCTGT 360
GAGGACAGGA GAACCAGGAT AGTGACACAT CACAGTGGCT GATGAAGGAC AGGGGGATGG 420
ACAGAAGTAT 430