EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM029-01911

Organism

Mus musculus

Tissue/cell

Cerebellum_neonate

Coordinate

chr1:172966440-172969370

Target genes

Number: 20
Name	Ensembl ID

Atf6	ENSMUSG00000026663
Dusp12	ENSMUSG00000026659
Fcgr2b	ENSMUSG00000026656
Fcgr3	ENSMUSG00000059498
1700009P17Rik	ENSMUSG00000026649
Sdhc	ENSMUSG00000058076
Pcp4l1	ENSMUSG00000038370
Nr1i3	ENSMUSG00000005677
Tomm40l	ENSMUSG00000005674
Apoa2	ENSMUSG00000005681
Fcer1g	ENSMUSG00000058715
Ndufs2	ENSMUSG00000013593
Adamts4	ENSMUSG00000006403
B4galt3	ENSMUSG00000052423
Ppox	ENSMUSG00000062729
Usp21	ENSMUSG00000053483
Ufc1	ENSMUSG00000062963
Rpl27	ENSMUSG00000079137
Dedd	ENSMUSG00000013973
Pfdn2	ENSMUSG00000006412

TF binding sites/motifs

Number: 11

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOXF2	MA0030.1	chr1:172967495-172967509	TGAACGTAAACAAG	+	6.58
GATA2	MA0036.3	chr1:172968578-172968589	AGAGATAAGAA	-	6.32
Gata1	MA0035.3	chr1:172968578-172968589	AGAGATAAGAA	-	6.32
Gata4	MA0482.1	chr1:172968577-172968588	AAGAGATAAGA	-	6.02
IRF7	MA0772.1	chr1:172967427-172967441	ACGAAAGTGAAAAA	+	6.55
PHOX2A	MA0713.1	chr1:172967873-172967884	TAATTCAATTA	+	6.14
POU4F1	MA0790.1	chr1:172967852-172967866	CATTAATTATTTAT	-	7.19
POU4F2	MA0683.1	chr1:172967850-172967866	TCCATTAATTATTTAT	-	6.02
POU4F3	MA0791.1	chr1:172967850-172967866	TCCATTAATTATTTAT	-	6.53
Phox2b	MA0681.1	chr1:172967873-172967884	TAATTCAATTA	+	6.14
SPIB	MA0081.2	chr1:172968566-172968578	GATGCGGAAGTA	+	6.14

Enhancer Sequence

TGTCTCAACA CAGAGGCGGG GGCCAGACAG AGACAGACAG GAGAGAGCTG TACCATAGAA 60
AACAGGGAAA ATCCACTGGA AATAAATAAA TGGTCAGAAT AATTTTGTTA AGATAATTAT 120
GGTGTCGTTA TATAGCTTAA CACAATGAAG TGATTAAAAC AAATGCTGAA ATTGGAGTTT 180
TAGAATATTG AACAATTTGA GGTCAAAGAG TTGAGATTCA AATTCTTTGA CTATATAGTG 240
CACATCCTTC CTTGCGCCGA ACTGGCTTCT CCGGACTTTA GTGCTGCAAA GGGTCTGTCC 300
TGACCTTCAG ACCAGTGCTC TTTCCATGCT AGGTTCAGAT AGGACATTTT TGTTATTCTC 360
TGTCATCGCC AGAAGGGATG GCTGTTTCCC AAATCTACAC AATTGCAGTG TGGCAGTGAA 420
AAAGAATTCA GACTTGAAAA CTTGGTCCAG CCACTTTCCT ATGGTGCGGC AAAGATGGGA 480
ATCGTCGTGA TGCCCAGTGT TTTAAAAAGC GTGAGAGTGC CATAGCCTCG ATACAGGTAG 540
GGTTAAGAAC CTGCGCATAC TGAATAGCTG CTGCACCTTT TTCACTAATT TGGTTAGAGA 600
GAGGTTCTTG AAATATAAAC TCGGAGCTTT ATTTTTAAAA GTGATTATCC TTCTTTTATT 660
GGAAGATCAA TCAAAGATAT AAATATAGAA AATAAAAAAT GGATTAAAAA CTCACTAGTC 720
TCCCCGTCGG GGAATCGAAC CCCGGTCTCC CGCGTGACAG GCGGGGATAC TCACCACTAT 780
ACTAACGAGG ACAACCATGA TGGGCTCCCT AAAGTAGCTG CTCAAGAAAG ATATTTGTAA 840
GCTATTCATG GTCCTTGGAT GTTATCAAAA TTTTGCTTTC ATGAAAAAAA ATGTATCTAT 900
CTGCTAATTT CCAACAGCCA GTTTAAACAG CAGAAAGGAA CAGGTTGCCA GTTAAAATCC 960
GCCGGTCACA AAGCAAACCA AGAAAACACG AAAGTGAAAA AGAGATTGGA AGGAGGAATC 1020
ACAGGAGTGG GAAGGAAATG CAAGAGGGCT CCAGGTGAAC GTAAACAAGT CCTTTATATA 1080
CACGTGAGAA ATTATCGAAG GACAAATTTA GTCAATAACA AAGAGAGACG TGATAAGTTT 1140
AATAACTCCT ATTTAATTTA ATACATCCAA AATATTATTT CAACATGCAA TTAATATAAA 1200
AAATTATTAA CTAGATTATT TTTCTTGGTC TTCAAAGTCG GCAATGTATT TTACACTCAA 1260
ATTTTAATAG GAAGAACAAG TAGTATCTAT ATAGAGTTCA TTAAAAATAT ATAAATCAAA 1320
AATACACGTA TGACTGTTTC CTACTTTAAG TTCTTCAGTA GCTGAAATGG GTAGCCATTT 1380
ACATTTTTAT TTAATTTTTT CATTAATGGC TCCATTAATT ATTTATTTTT AATTAATTCA 1440
ATTAAAATAA AATTTTAAAA TGCGATTTTT ACACGTACTG GTCAGTTTCA AACGTTTAGT 1500
AACTGACGGC TACAATTTGA GCGTCTCAGT TACGGAGCCT TGTTTGTGCA AGGTTGAGAT 1560
TCTGACAGAA CATCCTGGAT TCCAGAAGAA CCCAAAACAG AAGAGATGAA ATGAAAATAC 1620
CTTTAGAACC TAATACGGGA AAATTTAGGG TTGATTTCAT TAGAAAGCAT AAAAAAAATT 1680
TTAACTTTGC GTTGGCCGGG AATCGAACCC GGGTCAACTG CTTGGAAGGC AGCTATGCTC 1740
ACCACTATAC CACCAACGCA GCACGGCGAC CGCTTTCGTT TCGTCTCTTT AATAGAAGGA 1800
AGAAATTTAC TGAGCATGTT TGTATCTGTT TTCCGCAAAT TTAAAAATGG ATTCCGTGAG 1860
AAAATTCGGC GTCAACCCAG AAGGAAATAT TTCCTCCGCT TCTCGCCCTG TTCACCGCCT 1920
GACGTTCTCG GTTCCAGGCT CCGCAAACGC TCAGCGCCTC CAGGCAGCTC CCAAAGTCCA 1980
CCCGGCACCG GTTCCATAAG CGACTTAGAA CGACCGGTGG GGAGGAGAAC TGGTCGCTAA 2040
GAGATCATCT GCGGCCTGAC TCGGCCCCTC TGATAAAAAG AAAACCGAAA GGTCCCAGAA 2100
GAGATGGATG ATGGAAGGTT TAAAGAGATG CGGAAGTAAG AGATAAGAAA GATCTGTCCG 2160
CTACTTTCAC TTGTTTTGCT TTGCAAAAAC GTTCCCGGAG AGTTCGTGTT TCTTTTTATC 2220
TGGAGAAATC ACAGATGGCG GCGTCATCGC CATTTAAGGG TATTAAAGCC CTTATAAAAA 2280
TGTATGAAAG CCACACTACC ATGTGTCAGG ATGGCCGAGC GGTCTAAGGC GCTGCGTTCA 2340
GGTCGCAGTC TCCCCTGGAG GCGTGGGTTC GAATCCCACT TCTGACAAAT ACTTTTTCCT 2400
TTTTTTCCCA TCATAATTGA ATAATTCATA TTGGTATCTT TTGGTAAAAA AGAAAATTAA 2460
AAAAATAAAT AAAATAATTC CCATCCTAAG ATCCCTTAAT TTACTACAAT TATCTCAACT 2520
CTTTCGTTGC TGAACCAATG CTAGCAAACA TTTGTAAGCA TGAGGTTCTC TCTCTATCGC 2580
CTTGCCTAAC CCCACCACCA ATTCTAATTA AGTAATTTGC TATTTATGGG AATGTGCTAT 2640
TTCATATAGC CGAGCCAAAA CAACAACAAC AACAAAAAAA AAACACCCTA AACTCTTCAT 2700
GACACCCTCT TTCTAGAAGA TCATAAAGGA AACACTTTCT AGTTTAAGAG AAGCTTGGTG 2760
GAGGGGGAAA TTGTCTTTTT GACAAGAGTG AAAGCTGTTA AGTTGACCAT AACTGTGAGG 2820
CTGGGAAGCT TTAGATCGGT TAATTAAAGT TTGTCAGACA CAGCTCTATT CCCCATCATT 2880
GACCAACTAG ACTCTGACTC TTGAAAAAGC ATTTGCTCTT TCTGAGGCTT 2930