EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM029-00524

Organism

Mus musculus

Tissue/cell

Cerebellum_neonate

Coordinate

chr1:60098760-60099640

Target genes

Number: 7
Name	Ensembl ID

Fam117b	ENSMUSG00000041040
Carf	ENSMUSG00000026017
Wdr12	ENSMUSG00000026019
Gm15464	ENSMUSG00000082609
Nbeal1	ENSMUSG00000073664
Cyp20a1	ENSMUSG00000049439
Abi2	ENSMUSG00000026782

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

GLIS2	MA0736.1	chr1:60099493-60099507	CACCCCCCGCGAGG	+	6.34
Lhx3	MA0135.1	chr1:60099042-60099055	ATATAATTAATTT	-	6
TCF7L2	MA0523.1	chr1:60098912-60098926	AAAGTTCAAAGAAA	+	6.23

Enhancer Sequence

GTATACCTAC ATACATGAAA TAAATAGATA AATCTTTTTT TAAAGCTTAT AATGATTTCT 60
CTAGCAGTTA GGATTGCTGG TAATTAGACA GTGCTTTGCT ATTTTTAATA CCTACATGTA 120
CAACCCATTT CACATTATTA AAATAAGTAC AGAAAGTTCA AAGAAAACTG GTAATGTTAT 180
GAACTGATAA TATAAGATGA TTTTTTAACT TTGGTCATAT AAAATATATA TATATCCACC 240
ATTAGGAGAT GTTTTCTTGG CCAGTAAATG TATAACTGAA AGATATAATT AATTTCCATT 300
AAAGAATGAG GTACCTGTAG CTGCTAAATA TTGATGTATT TACAATATTA CTTTACAAAA 360
CTTCGCTTAA GCCAGAATCA AATAATCCAA TACTTAAATA CTTAGAGCCC AAACCGCAGG 420
GAAACATCAT CTCCCCACAA ACTATTTCAG CGACCCAGAG TTGCTAGCAG GTTGTGTGTT 480
TTGTGCATGA AGATCATACA TTATATGGCA TCCCCGATTC ACACACACTA CTGGCAAGCC 540
CACAGCTCAC GGGTAGGACG CCAAGCAGGA TTGTTTTTCC CGTCTCCATT TTTCTTAGAG 600
CATCAGGTAT CGGCTGCCTG CATCATCACC CAGGTGAGGT CAGTGGTCAG AGACACCTGG 660
CCTGCTTTTC CCCAGCCGAA TCCGTGCGGT GATGCTGGGG TCCCCACCTG GGAGAGGAGG 720
CTTTGTGCAC CGACACCCCC CGCGAGGTGA TGCATTCCGA CATCACCACG ACCCGCAGCT 780
TTGCTTAGGT TCTGTTCTCA CCACGTCCAT CTCGCAATTG GTCTGTTCTG AAGACATCCC 840
ACAACAGGAC AATAATAGTA ATAAATTAAG CGCGACGTAC 880