EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM029-00279

Organism

Mus musculus

Tissue/cell

Cerebellum_neonate

Coordinate

chr1:37640300-37643740

Target genes

Number: 7
Name	Ensembl ID

Inpp4a	ENSMUSG00000026113
6330578E17Rik	ENSMUSG00000026112
Unc50	ENSMUSG00000026111
Mgat4a	ENSMUSG00000026110
Tsga10	ENSMUSG00000060771
Lipt1	ENSMUSG00000037216
Mitd1	ENSMUSG00000026088

TF binding sites/motifs

Number: 17

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

BHLHE40	MA0464.2	chr1:37642936-37642946	GTCACGTGAT	-	6.02
ELK3	MA0759.1	chr1:37642715-37642725	ACCGGAAGTA	+	6.02
ETV1	MA0761.1	chr1:37642715-37642725	ACCGGAAGTA	+	6.02
ETV4	MA0764.1	chr1:37642715-37642725	ACCGGAAGTA	+	6.02
EWSR1-FLI1	MA0149.1	chr1:37640551-37640569	CATTGCTTTCCTCCTTCC	-	6.3
IRF1	MA0050.2	chr1:37643186-37643207	TGCTGGTTTCGCTTCCTCTTT	+	6.04
IRF1	MA0050.2	chr1:37643192-37643213	TTTCGCTTCCTCTTTCTCTTT	+	6.6
Lhx3	MA0135.1	chr1:37643682-37643695	AATTAATTAATTT	-	6.92
NRL	MA0842.2	chr1:37641117-37641130	AATAGTGCTGACA	+	6.11
POU6F1	MA0628.1	chr1:37643683-37643693	ATTAATTAAT	+	6.02
POU6F1	MA0628.1	chr1:37643683-37643693	ATTAATTAAT	-	6.02
RELA	MA0107.1	chr1:37643129-37643139	GGAAATTCCC	-	6.02
SREBF2(var.2)	MA0828.1	chr1:37642936-37642946	GTCACGTGAT	-	6.02
Srebf1(var.2)	MA0829.1	chr1:37642936-37642946	GTCACGTGAT	-	6.02
TFEB	MA0692.1	chr1:37642936-37642946	GTCACGTGAT	-	6.02
USF2	MA0526.2	chr1:37642932-37642948	TGGGGTCACGTGATTC	+	6.41
ZNF263	MA0528.1	chr1:37640547-37640568	CCCTCATTGCTTTCCTCCTTC	-	6.2

Enhancer Sequence

CACATATACA CATGCACACA TACACACACG CACGAACGCA CACACACATC TCTGAGGGCC 60
CCACCTTCAT AACCTAGCCA GTTCTAACGA CCTCATTTAT AATCCCATCC CACCAGAGGC 120
TACATTTCAA CGCATGAGTG TGAAGAATGG GCATCAACAT TCAGAACCTG CTCTGCCTGT 180
TTCTACCACC AGACTTGTTT AATGTCTATG TCCTGTGAAT CAAGACCCTC TTAACACAGT 240
ACCTCCTCCC TCATTGCTTT CCTCCTTCCC AGTGCACACC CAGAACCTAG TTCTTGGGTG 300
AACTTAAAGA GCTATGTCTC AGGAGTATGT CTGCGCTTTC TGAGCTCCAG AGAATGAAGA 360
TCTAACTGTT GGGTTTTGGA AACACCTGGT CACTGGGTCC TGGCCAGGTG CTCCTGAATG 420
CTGTCCATTG TGTCCTTGGG GAGACATGAA AACTGTGCCA GGACATGTGC CTGGTTTTTC 480
TTCCAGCAGC CAACCCTACC TTTTCCGGTC ACGTTAAAAA TACGTCTGAA ACACCTGCCC 540
ACTTGCTGCA GCTTTCGCTG GCCCCACCTT TGGTAAATAC ACAGCTGCCA CCACCCCTCT 600
CTCTCTCCCC CCAGCTTGCT CTCATTGATT ATTTCTGAAT CGCGGACTCT CTGACAGCTT 660
GGCTATGCCC AGGAAGGCGC TGATTTGCCT CTTTATGGAA GCAGTGTGAT TCTTGGATTG 720
TGACCCTCTC TGGTATAAAG GATCAGAAAG GACTTTGGGG TTTAGCTGCT GGCACAGGGC 780
CTCCTGGAAA AACGTCAGGC ACCCTTGGAG GTGTTTAAAT AGTGCTGACA GGAAAGGACA 840
TCCACCACAG ATTTATAATC TGTACCTTGC TAGGGGCCAA GACCAGCACA ATGTACAAGG 900
AATCAGTTGT TTAAACTAAG CAGGAAACAG ATGCTTTCTG TTAAGCTGCT TATTATCAAA 960
GTACCTGTCA AGCATCCCGT GGTTAGAATG TCTCTGGGAA GCTAGGAGAA CTCCAGGTAC 1020
CTGGCCTGCT CTCCTGTCAA ACCCTACATC CCCGCACTGG GCAGTTTCCT TCTGGCATGG 1080
AAGAACTACA TGTTTCCCCA TGGGATGAGA GGCTTTGGGA AGAATCCTAT AGGGATGAAG 1140
TTTGGTTGCA ATAAAGGTGG AAGACCCATG ACAACAAGTG TTGTATGTAT TTGAGTAACT 1200
TCATGTGGGA GCACTGGTAG GTGTGTGTGT ACCTGTGTGT GTGTGCATGT ATGTGTGTGC 1260
ATGTGTATGT GTGTGTGTAT GTGTACATGC ATATGTGTAT ATGTGTGTGC CTGTGCTTGT 1320
GTATGTGTTT GAATGTGCTT GTGTGTGTAT GTGTGTATAT GTATGTGTTG TGTCTGTCTG 1380
TATGTATATG TGTATATGTA TGTGTGCCTG TGTATGTGTG TGTGCATGTG CTTGTGTGTT 1440
TATGTATGTG TGTATATGTG TGTGTGTGCA TGTGCTTGTG TGTTTATGTA TGTGTGTATA 1500
TGTGTGTGTT TGTGTATGTG TGTGCATGTG TGCTTGTATA TATGTATGTG TGCATATGTG 1560
TATATGTGTG TACCTGTGCT TGTGTGTATA TATGTGTGTA TATGCTTGTG TGTGTATGTG 1620
TGTACATGTG CTTGTGTATG TATGTATATG TACGTGTATG TGTGCATGCA TAGTCATGGG 1680
AAAGCATACA AAGCATTCCT TTTGAGCTGT GTACCAACTT CCAACCAATA TGAATGAACT 1740
TTTACCTTCC TCCAAGCTGG CTTAGGACCA CAGAGGGAAT TGGCTTTGTT CCTCTACTCT 1800
AGTGACGCCA CCCCTTGCCC CTGAGTATTT CCAGTCCCAT AGCCACTATC CACTAGAGCA 1860
GTGGGAGGGC TCAGCGAATG CATTTTCTTA TGGCCATTGC TCACCAACCT GTTTATGAAA 1920
GAGGTTTGAG GCGTGACAGC CAGTAAATCT CAGTGTTGCA TAAGGACAGA CACTTGTTCT 1980
CGCAGTATAT TTGAAGCCAC TGTTGGGGGT GCCACTCAGG ACTCTCCAGA GAAACAAAAC 2040
CAGGAGCAGA GACACACTTG TGAAGATGCA CGCATACACA GAAATACCCT CTCCTCTGTC 2100
TGTTGTGAGC TTAAGTCCTG ACAAATCCAT TGCAAGTTAA AAATAAATAC CAAGTTTAAA 2160
AAAAAAAAAA AGAAAAGCAT TCAATACATC CAGCCTAGCC CACCATGCTT GGTCACTTAA 2220
TAGTCTGCAG CATGGCAAAG GTATCCACCA TCAAGCTTAC CCTGCAACTG ACTGTCACAG 2280
GAACCATCCT GAAGTCGGCC TGTGAGAACA GAATGGGTAT GTAGATACTC ACCATTAAAA 2340
CTCGCCACTG GAAGCACACT GGGTCTGCAG ACTAAGAGAA ACATTACATT CAAAGGAGAG 2400
CTGAGTGACA GGCACACCGG AAGTACTGAG TCATCGGTTC CCGGCTGGAA CCTGCTCACC 2460
GTGCCAAGAC TGCATTGCCA GCCTAGGGCT GGAAGAAAAC CCAAACCTGA AGCGTGGTTT 2520
CTACTGAGTG ACTGACTGTC TTTGTACCAC AATGAAGTTG GGACTGCAAA AGCTGAACCA 2580
TCGCAAACCC AGGACAGTGT GTCTGTGCAG TGTGGAGGTC TGCGGTCAGC TGTGGGGTCA 2640
CGTGATTCTG AAGGCCCAGA AGGCTCCTCC ATGTGCCATC TGTCAGTTGG AACAGAAAGG 2700
CTCATGGCAC AGTTCAGAGG TATGAGCTGG AGAGCCAAAG GCATAAGTTC TACTTGGGTT 2760
GAAGTCTTGA GAAGCAGAGG CCCAGAAAAA GAGGAAAGAC CGATATCTTC TCACAGAAGC 2820
CTGCTGTGCG GAAATTCCCA GAGCCTCAGT CATACCCTGG CATGCTGCCG CTGCAGCTGC 2880
ATTTTCTGCT GGTTTCGCTT CCTCTTTCTC TTTAACCTCA CAATATAGCT GCTAGCCTGG 2940
TCTCTGTATG GGAGGGGTCT GCATTCTGTG AGCCTAATTC AACAGTACAT GCTGAGTACT 3000
TAGCCTTTGG CAGATGACAC GTAAGACACA TCAAAACAAT CATCCATCAT GATCAAGTAG 3060
GCTTCATCCC AGGGATGCAG GGATGGTTTA ACATAATCCA CTATATAAGC CAACTCAAAG 3120
ACAAAAACCA CATGATCATC TTGTTAGATG CTGAGAAAGC ATTTGACAAA ATCCAACAAC 3180
CATTCATGAT AAAAGTCTTG GAAAGATCAG GAATTCAAGG ACCATAACTA GACATAATAA 3240
AAGCCATGTA CAGAAAACCA GTAGGCAACA TCAAACTAAA TGGAGAGAAA CTTGAAGCAA 3300
TCCCACTAAA ATCAGGGACT AGACAAGGCT GCCAACTTTC TCCCTACCTA TTCAATATAG 3360
TACTTGAAGT CCTAGCCAGA GCAATTAATT AATTTTTAAT TAGCAATTAA AAAGAAGATC 3420
AAGAGAATAC AAATTGGAAA 3440