EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-32919

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr9:108747490-108748030

Target genes

Number: 12
Name	Ensembl ID

Nicn1	ENSMUSG00000032606
Lamb2	ENSMUSG00000052911
Qrich1	ENSMUSG00000006673
CT010508.1	ENSMUSG00000092915
Dalrd3	ENSMUSG00000019039
Ip6k2	ENSMUSG00000032599
Nckipsd	ENSMUSG00000032598
Celsr3	ENSMUSG00000023473
Slc26a6	ENSMUSG00000023259
Tmem89	ENSMUSG00000025652
Ccdc72	ENSMUSG00000091537
Ccdc51	ENSMUSG00000025645

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF16	MA0741.1	chr9:108747934-108747945	GCCCCGCCCCC	+	6.02
KLF5	MA0599.1	chr9:108747934-108747944	GCCCCGCCCC	+	6.02
SP1	MA0079.4	chr9:108747931-108747946	TTGGCCCCGCCCCCA	+	6.56
SP4	MA0685.1	chr9:108747931-108747948	TTGGCCCCGCCCCCAAT	+	6.65

Enhancer Sequence

GGCCTCCAGG TACCTCTGGT GCCCTTCTCC CATCCCAGAC CCTGATGGGG CTTCAGCATC 60
CTGGCCTCTA GCCCTAGGCA TGGCATTGCC ACCAGGCCTG GAGCTCACTT TGCTTGAATG 120
ACTATGATAT GTGAACCCTA GACCTCTATG TGAAGGCTGA CCCTAGTTGC TGACCCCAGG 180
CCTAGAGCTG ACACCCAGCT AGTCACTGAC ATCAGGCTGG GTACTGATCC TGGGTTGACC 240
TTCGCCACCA CTGTGACTTG TGACCCCTTG CTGACCACAC TGTCATTGAC TCCAGCCCCT 300
CCCACCATAT GCCCTTCTCA TTATTAGTCC TGAGACTTTC CTTGACTTTC TTTCTGATCC 360
CTACTCCCTT CATTCCTCAG TGACTCACAC TACCCTGTGA CAGCTGATAC CCCCCTCTGT 420
GCTGACCCAT AGAGCCTCTT ATTGGCCCCG CCCCCAATTG GTGCCCTGTT GACTGTATTC 480
TGAGCTTCTG TCTTTTCTGA TCTCCCGGTG ACCTTTACTG ACTCTTACTG ACTGACCCAC 540