EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-32730

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr9:107279340-107281880

Target genes

Number: 29
Name	Ensembl ID

U6	ENSMUSG00000064517
AA543401	ENSMUSG00000092125
Dock3	ENSMUSG00000039716
Mapkapk3	ENSMUSG00000032577
Cish	ENSMUSG00000032578
Gm17041	ENSMUSG00000090570
Hemk1	ENSMUSG00000032579
6430571L13Rik	ENSMUSG00000037977
Cacna2d2	ENSMUSG00000010066
Gm17141	ENSMUSG00000091816
Gm17118	ENSMUSG00000091425
Tmem115	ENSMUSG00000010045
Cyb561d2	ENSMUSG00000037190
Zmynd10	ENSMUSG00000010044
Rassf1	ENSMUSG00000010067
Tusc2	ENSMUSG00000010054
Gm9917	ENSMUSG00000053666
Hyal2	ENSMUSG00000010047
Hyal1	ENSMUSG00000010051
Nat6	ENSMUSG00000079334
Hyal3	ENSMUSG00000036091
Ifrd2	ENSMUSG00000010048
BY080835	ENSMUSG00000070285
Sema3b	ENSMUSG00000057969
Gnai2	ENSMUSG00000032562
Slc38a3	ENSMUSG00000010064
Sema3f	ENSMUSG00000034684
Rbm5	ENSMUSG00000032580
Rnf123	ENSMUSG00000041528

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CDX2	MA0465.1	chr9:107280665-107280676	GAGCCATAAAA	+	6.14
Foxd3	MA0041.1	chr9:107279871-107279883	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr9:107279875-107279887	AAACAAACAAAC	-	6.32
Foxj3	MA0851.1	chr9:107281624-107281641	TATTTTGTTTACCATTT	-	6.2
ZNF263	MA0528.1	chr9:107281830-107281851	GGAGGAGGATTTAGGGAAGGG	+	6.18

Enhancer Sequence

TCCTTGGTTG GTTTTATTTG TTTGCTTTAA GACAGAATCT CATACTGTAG CCCAGGCTGG 60
CCTCAAGCCT GAAGCAATCC TCCTGCCTCA GCTTCCTGAG CTTTGGAGGA GTGAGTCTAG 120
TTACTCAGCT TAGAAAGGCT CTTTTACTGA GCACGGGCAA GGCCACGTTT AATCCCTAAA 180
ACCATCTTGT TTCAGAGGAC TCAGGCTCAA CTAGGGGCAA TGACCAACCC TGACTTCACT 240
CCTGGCAATC CCAGACTCCC CTGGTATGTG CCAGAACTCT TCCTCCCCAA CTAAGGACTA 300
AGTATGTGTT CCAGTCAGAG GGTCATCTCC ACCTCAACCC TTTGTGAGAA GAAAGCTGTA 360
AAAGAGCCGA TAATCCCAGC ACTCGGGAAG CAGAGGCAGT CGGATTTCTG AGTTCGAGGT 420
CAGCCTGGTC TACAAAGTGA ATTCCAGGAC AGTCAGGGCT ATAAAGAGAA ACCCTGTCTC 480
GAAAAAAACA AAACAAAAAC AAAACAAAAC AAAACAAAAC AAAAAACCCC AAAACAAACA 540
AACAAACAAA AGAAAAAGAA GAAAAAAAAA AGAAAAGAAA AGAAAGCAAG CAAGCTGTAA 600
GAGGCCTGTG GAGCAGAGAC ATCGCCTGTC ATGCTAGCCC TCCTCCATGA CAAGCCCCCC 660
AAGGTGGGAG ATGGGGCTCC CATTTTGGAG CAGGTAGTTT GACAGTTTGC TGACAGCATC 720
AAAGAGGGAA GAGATGCGCG TCTGGCCCCA ACTTGGCCTC TACTAAAAGC ATCCCGGTGT 780
TCGTGCACTC TTCATCCTAA ACCGATGGAC TTCAAAGGCT GCGCTGGAGG AGGTGAGGCA 840
TCACTTAATG GCATCGCAGG CAGAACTGAA GAATTCAGAG ACTGCTGCTA TGGTTGCCTT 900
CCTAGTATAC CTGGTACGGT TCCCACAGCA GTCCCAGAAG ACTGGAAGCC CCAGGTTCTA 960
CCGCTCTGTT AACCCAAGGA TTTGCTTCCC CACTACTCCG GTGTCCCAGA CTTTGGCCCC 1020
CTGCGGGCAG CGGACAGTGC TGCTGGAGCT CGCTGCTGCG GAGGGCAGCA CCACCTGGAC 1080
CGACGCACAT GCGCGGAGCA GCCGCCTGGC CCTGCCGCAG CAGCCCGTGC CCCCCGCCGC 1140
CTGTGCACGG AACGCGCGAG CAAAGCAAAC AAAGACGTAT TGGTTTCTGC TCTATTAGAG 1200
GCGCAGGAGG GGGGAAATCA ATGTTTAGTA AATGGGAAAA GAGAAAATCG TTCAGGAAAG 1260
ACAGTCTATT TCCAAGCCGG AGAGAGGTTC GTAAACAGCA CAGGCCATTG CGGAGGAAGC 1320
ACGGCGAGCC ATAAAACTCC CCCGAGCGGA GGAATGTTCA CTTAGCGCGG CCGGCTGGGC 1380
AGGGTGCAGC GCTAACCCGG GTGCCTTAAC ACTAGACGCC CAGGACTCCT CCAGTAAGCA 1440
GAGATGGAGG AAAGGTCCTG GCTTGTCAGT GCAAAGTCCC ACCTGGGCAC CTCTTGTGTA 1500
CTGCACGGCT TGCCCCTAAT CCCTTTCATG TTCCACCATT GCTCACTGTG TCCTCTCTTA 1560
GCTTACTGGA GGCTGCCCAG AGCGGGCAGC GACACATCGC CCTGACTCTC CTTCACCAGC 1620
CTCGCCTCAA AACTCTAGTC ATCCTAACCT GAACTCGGTT GTGTTCAGAA GGGTCAAGAC 1680
TGCTTTCCAG AAAGGAGAGT TTAAGCTGGA CCTTACTTCT GCAACGTTCT CCAAGTTAAG 1740
AAGGGAAGGG ATGGGGACCT AAAGTGAAGC AATGTCCTAC ACAAAGGCCG AGGTTCTTGA 1800
AAAGTGATCA CAGGCTGTAA GAGGATGAGT CTGGCCCGGG AAGGAGTGGT GTTGCTGGAG 1860
AAGAGGAGGC TTGGATTGGA GAAATTAATT GAAGTGGGAG TTGGCATCTT GGTAGTCGGA 1920
GGTACCTCAG CCCACACTTG GCCAGGCTGC AATAACTCCA AAGCAACTAG AAAAGCATCA 1980
TCGCTGGATG GTGTGTACCT AAGGGAAGCT GCAGATATGA GGGTGAAGCT CGAGCATGTC 2040
CTGTTGGAGC CTCTTAGGAT AGGATGGGTG TTGACCTCCT GCGATGGCTG GGACTCTGCT 2100
CCTTCCATCC CCACTGGGTC TTGAGGCTGG CATTCCCTTG CTTTAGAGAG GGAGGCTCAG 2160
CAGCACGCTT GCGACAGAGC CTTTGTCCTC TCCATTCATC AAGGCGCAGC AGGCTGCGCA 2220
GAGAAGTATT GAATTTTAGC TTAAGATGGA TGGCACGACT ACAGTCTCCT TTACAAATGA 2280
ATTATATTTT GTTTACCATT TGTGTGTGTG TTTGTGTGCA TGTGTGCCAC GTGGGGGTAT 2340
AGGTTTCAGG TCTATTCTGG TGAGGGGCAT GCTCCCACCG GAAGACACAA GTGCTTAGGG 2400
ATAGGAACTC AGATAAGAAG GAGCAATGAG AATGTAGGCA GCGTTTGCAA GAAATTTGAT 2460
AAAGAAAACA CCCTCGTGGG TGGGGATGAA GGAGGAGGAT TTAGGGAAGG GAGGCCATTT 2520
TTACTATCAG TGTTGCTGCT 2540