EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-32346

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr9:72806800-72807380

Target genes

Number: 9
Name	Ensembl ID

Nedd4	ENSMUSG00000032216
Prtg	ENSMUSG00000036030
Pygo1	ENSMUSG00000034910
Gm20510	ENSMUSG00000089865
Gm5918	ENSMUSG00000086158
Ccpg1	ENSMUSG00000034563
Pigb	ENSMUSG00000032203
Rab27a	ENSMUSG00000032202
Rsl24d1	ENSMUSG00000032215

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HNF1A	MA0046.2	chr9:72806886-72806901	AGTTAATTTTTAATT	-	6.49
SP2	MA0516.2	chr9:72806802-72806819	AGGTGGGCGGGGCGGAG	-	6.54
SP3	MA0746.2	chr9:72806803-72806816	GGTGGGCGGGGCG	-	6.14

Enhancer Sequence

GAAGGTGGGC GGGGCGGAGA TGCAGTTGCT GTGCGCCCCG GGAGCAGGAG CTGTCTTGTA 60
GAGTGTCCAT GGCTTTACTT TTTTAAAGTT AATTTTTAAT TTACATTTTT TACCCTTAAT 120
TAATTTATTT TTGTTATGCT AAGGATCAAA CCCAGCATCC TGTGTATGCC AAGCCACTGA 180
GCTACATCTC TAGTAACTAT GTATATATTA AATGTATGAA TGCGTGCATT CATGAGTGTG 240
CATCAGGTGT GTGCAAATGC CTGCGAAGGC CAGAAGAGGG GGGTCAGATC TCCTAGAACT 300
AGAGTTACAG ATGGTTGTGA GCCACGCAGG ATGGAAGAAT AAGTGCTCTT AACCACTGAA 360
CCATCTCTCC AGCCCCAATA GCTACAGGGG TGTGAGCAGG GTGGAGGGTG TCTTATTCTG 420
TAGCCCACAC TGGCAATCCT CCTGCCTCAG ACTTCCAAGT GTTGGGATTA ATGGGATGCT 480
CTCCCATCCC TGGCTAAACC TCAACTTAAA GTTGATAAAC AAGTCTAAAG CTGCTGAGAT 540
GGGCCAATGA GTTAATGCAC TACCACCAAG CCTGACAGCT 580