EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-31748

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr9:44574420-44575750

Target genes

Number: 20
Name	Ensembl ID

Trappc4	ENSMUSG00000032112
Rps25	ENSMUSG00000009927
C030014I23Rik	ENSMUSG00000060380
Bcl9l	ENSMUSG00000063382
Cxcr5	ENSMUSG00000047880
Ddx6	ENSMUSG00000032097
Phldb1	ENSMUSG00000048537
SNORA2	ENSMUSG00000064658
Arcn1	ENSMUSG00000032096
Ift46	ENSMUSG00000002031
Tmem25	ENSMUSG00000002032
Ttc36	ENSMUSG00000039438
Mll1	ENSMUSG00000002028
U6atac	ENSMUSG00000080358
Atp5l	ENSMUSG00000038717
Ube4a	ENSMUSG00000059890
Mpzl2	ENSMUSG00000032092
Mpzl3	ENSMUSG00000070305
Scn2b	ENSMUSG00000070304
Scn4b	ENSMUSG00000046480

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HSF1	MA0486.2	chr9:44575000-44575013	TTCCCGAATATTC	+	6.04
RUNX1	MA0002.2	chr9:44574824-44574835	TTCTGTGGTTT	+	6.32
ZNF263	MA0528.1	chr9:44575418-44575439	AGAGGTGGAGGAGGGAGAAGA	+	6.76
ZNF263	MA0528.1	chr9:44575421-44575442	GGTGGAGGAGGGAGAAGAAAA	+	7.46

Enhancer Sequence

TCAGAACAGC CAGGTCAGCA TAGTGAGAAA CCTTTTCTCT AAAACTAAAA AAAATGGAGG 60
CTAGAGGTAT GGCTCAGCAG TTAAGAGTAC TTCTTGTTCT TGCATAGGAC GTAGGTTAGA 120
ATCCCTGTAC CACAGGGAGG CTGATAAGTG TCCATAACTA TAGTTCTAGG GAATCCAATA 180
CCATCTTCAG GTATTGCACA GACACACAAC TTCATATACA TAAAATAAAA ACATCTTAAA 240
ATATAAAAGA AAAAACATAC ACAATAACAA CAACAACATC AACTCATGGA ATTGGGGCTC 300
AGGGTCGGTA TATGAGGTTT TGGAAATTTT ATGTCTAATA CCAAATTTTG GGAGGCAAGC 360
CTACTTGATG TAAATTTTAT ACACCTGAGG CTGGAAAAGA AACTTTCTGT GGTTTAAAGA 420
CCAAACATGA ATTTCTCCTC TAACCAAATT CTTATCAAAA GAGTTGTTAG TAGAACTTAA 480
TAGGACAAGT ACCAAGAGAG TCAGTCATGT TACTTAGGTA TGCTTTCAAA GCACCTTTAA 540
AAATTCTTCA AAAGTTACTA GATCTAAGGA TCTCCTCTTA TTCCCGAATA TTCAGATTTC 600
AGTCGATTAA GGAGGATCTG GTGGAGTTAA TTCTGCTTTC TCCTACCCTC ACCTACAAAT 660
AACCTCTCCT ATCTTGGTAA CAGATGAGTT CATAGAGAAA TAAGCTCCGC TGGCATCAGA 720
GTCCCCAAGC ACAGCCCACC TCTCCTATTC CACATAACAG CTGTGATTAC AGTAAGCCAC 780
ACTCCTGTCA CTCCACCAAA ACGGTCGGTC CCTTAAAGAC AGAAACCCTG TGCTGTCACT 840
CCGTTTCTCT ACGTTCTATA TACACTCTGC ACCAGCCTCG CTGCCAAAGA CACGTACGCG 900
CTACCCTAGC ACAGGGTAGC TACGGGGACA CCGGGGTCCC TCAAACGGGC GCCCGAAGTT 960
ACCATTTCCG CACTGCCTCT ACTTCCCCCT TTCAATTAAG AGGTGGAGGA GGGAGAAGAA 1020
AAGCTTTGAG GCGTGGTGAC AAGAGGACGA AAAGCGGCGG ACAGGCCCAG CCTCCAGCCC 1080
TGCGGTTCCG GAGCTCGCAG GGAACCGGCG GGACCTGAGG ACGGAAGACC CGCGCGACAA 1140
CCACCAGCCC GAGTGGCGGG CGGGCGGACG TGGCGGCGCT GCCGGCGGAG GCTAGGTGGG 1200
CGCGGCAGCT TTCGCTCTAG GACTCCGGGA GGCCGTGCCA AGCCTGGGCC GACAGCAGGG 1260
CTCCGGGCGC GGCTCCTGCG GTCCCGGCCC AGCCGGCGAG GACGTGGCGA GGGAACCCGG 1320
CTCGGCGCTT 1330