EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-31708

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr9:44074600-44076060

Target genes

Number: 28
Name	Ensembl ID

Thy1	ENSMUSG00000032011
Usp2	ENSMUSG00000032010
Mfrp	ENSMUSG00000034739
C1qtnf5	ENSMUSG00000079592
Gm20444	ENSMUSG00000092258
Gm3906	ENSMUSG00000092003
Rnf26	ENSMUSG00000053128
Gm10687	ENSMUSG00000074408
Ccdc153	ENSMUSG00000070306
Pdzd3	ENSMUSG00000032105
Nlrx1	ENSMUSG00000032109
Abcg4	ENSMUSG00000032131
Hinfp	ENSMUSG00000032119
C2cd2l	ENSMUSG00000032120
Dpagt1	ENSMUSG00000032123
H2afx	ENSMUSG00000049932
Hmbs	ENSMUSG00000032126
Vps11	ENSMUSG00000032127
Gm10080	ENSMUSG00000060467
Hyou1	ENSMUSG00000032115
Slc37a4	ENSMUSG00000032114
Trappc4	ENSMUSG00000032112
Rps25	ENSMUSG00000009927
Ccdc84	ENSMUSG00000043923
C030014I23Rik	ENSMUSG00000060380
Bcl9l	ENSMUSG00000063382
Cxcr5	ENSMUSG00000047880
Ddx6	ENSMUSG00000032097

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOXP1	MA0481.2	chr9:44075022-44075034	CTCTGTTTACTT	-	6.37
FOXP2	MA0593.1	chr9:44075023-44075034	TCTGTTTACTT	-	6.32
Foxa2	MA0047.2	chr9:44075025-44075037	TGTTTACTTTGT	+	6.18

Enhancer Sequence

CTCTCCTCAG CAAAGATAAT CCTAACCTGA GTGATTCTGT TTCATCTCCT ACCAGCTCCT 60
GCCTGGCACT GGAGTTTCAC AGCTGCCTCT GCCCCGAGAT CCAGCCCAAT CATCTGCTTT 120
TAGGTTTTAT TTTTGCTTGA CTGCTAGCAA GCTCAGATAG GAGCCCTGTG CTCACTCGCA 180
GGCCTTTTCT GAGCCTGGCT TTTTTCCCCC ACTCATCCTT ATTCATTTCC GTCTGCTTTT 240
GTGCCACGGC TGAGTTTTAA TGGCTGTATC ACTTTATCAT CTCTCTGACT TTTATGTAAG 300
CTGCCTGTAA GGCTGGCATA AATAATAAAT GGATGTGTGA ATGAACTTCC TGCTTGACAC 360
AAGGATGTGC CGCCTCTGCC TCACACTTCA GCCATGCCAA CCTGGCCTCG TCAGCCCCCC 420
TCCTCTGTTT ACTTTGTGGC AGAGCTCCCC CAAGCCCTGG ATTCACACAC TATTCCCTTG 480
CTCTTTATTC GAAGCCTTCC CCCACAGGCA GCGGTGGCAG TCTTACAGAT CTCTCCCTAC 540
TGGTTTTTGC CAGCCTCTTC ATTTCATCAT TTCAGAGAGA TCCTTCCAGA CCTTACAAAA 600
CCCTACTTCC TCAAGTCCTC TGTGCCTCCA CTGTTGGCCT ATTCCACTCC CTCATCCCCT 660
GCAGAAATCA GCTCCCTAAA CTCCTAAGCT ACTTGACAGC TATGAAACCC AGGCCCACAC 720
AAGCTATTTT TCCAGGTTTG CCCCCAGCCC ACACCTCATC CTCCAAGACT ACTATTGGAT 780
TCTTGCTCTC ACCTTCCTAA CTCAGTCCCT ATACTTTGGT TAGCATTTAC TTTATCAGAA 840
TCCCAGACAC TCTTTGAAGA TACTGCTCAA GGTACTCTTT CCCAAGGAGT CTATTCTGGC 900
CCACCCCATC CCACAGCTCC TTGACATGCA TATGTGGCTA GGCTGGCGTG GCCTCCCTCA 960
CTGCCGCTAG GGCAGAAGGG AAGCAAACTT AGGAAGAGGC TGCACTGAGC ACAACTAGCC 1020
AGAGCAGGAG CTGGCTGAGG TCTTGAGTGG GCTGGAAACA GGAGACCTGG GGATTAGAGA 1080
AAGGTCCTGA AAACCTGACA AATCCCAGGA TTGACATCAA TCAGCCCCAG GTCCACTGAG 1140
TCAAGATAAG ACGTGCAGGG TCTAGGATAA TTCTCTAATC GAGCAGTTGT CATGGCACTA 1200
ATCAAAAGAA GGAATGCAAC AGAAGTTGCG GAGCTTTTCC ACCAAACTGG GTCCCAAATA 1260
GCTTTCCCAC TTCCACTTGG CTTGGGGGCG GGGGGGCAAA GTGAAGCTGC CAGTAGGCCT 1320
GTATTCAGCG CCCAAGCTCC GGCAGAATCC CCAGTGCCAC TTGCCCGCTC CCGCGACCCA 1380
GCTGCCCGGC TCTTGCTTCC GGGGCCCAGC GCAGCCGTCC AGCCGGGGGC CGGAGGAGCG 1440
ATCGACCCAG TTAGGCCTTT 1460