EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-30555

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr8:107936760-107937350

Target genes

Number: 19
Name	Ensembl ID

Cbfb	ENSMUSG00000031885
U6	ENSMUSG00000064494
Fbxl8	ENSMUSG00000033313
4931428F04Rik	ENSMUSG00000014837
Lrrc29	ENSMUSG00000041679
Fhod1	ENSMUSG00000014778
Slc9a5	ENSMUSG00000014786
Plekhg4	ENSMUSG00000014782
Kctd19	ENSMUSG00000051648
Lrrc36	ENSMUSG00000054320
Tppp3	ENSMUSG00000014846
Atp6v0d1	ENSMUSG00000013160
Agrp	ENSMUSG00000005705
Mir1966	ENSMUSG00000089432
Ctcf	ENSMUSG00000005698
Gm5915	ENSMUSG00000080021
Pard6a	ENSMUSG00000005699
E130303B06Rik	ENSMUSG00000013155
Gfod2	ENSMUSG00000013150

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF16	MA0741.1	chr8:107936980-107936991	GCCCCGCCCCC	+	6.02
KLF5	MA0599.1	chr8:107936980-107936990	GCCCCGCCCC	+	6.02
SP2	MA0516.2	chr8:107936976-107936993	ATCTGCCCCGCCCCCCC	+	6.11
SP3	MA0746.2	chr8:107936979-107936992	TGCCCCGCCCCCC	+	6.01
ZNF740	MA0753.2	chr8:107936983-107936996	CCGCCCCCCCCCC	+	6.64

Enhancer Sequence

CTGGGGAGAG CCTCCAGCCA TCAACAGCTT GGGAAACCTG TAGTAGTTGA GGGTCATCCA 60
TCATGACTCC ATCCCAAAGA GCATCTCATT AACACACAAC CTTCTTCCAT AGAACATTAT 120
AGTGATAGAA ATTCAGTGCC CAAAAGACAG GACTCAATGC CCCGAGCCAG GATTCTCTGA 180
CCTTTTCAGA TCAGGAGTTC CCATCGTGCC TCCAAAATCT GCCCCGCCCC CCCCCCAACT 240
GTCAGATCTG GATTTCCCCT TTAAATGTCA TCCTCATCTT GCTCTAGAAT AAACATGGGC 300
TTTAAGGTAC AAAGGCTTCC ATCCGTCAAA GAGCTACACC TTCTTCACCC CACAAACTTG 360
GAGCCCCCTC AAATCCTCAG CGGTGTGGAA CAGTTCATCT CACAAGGCAG CATGGCATGG 420
TCTCTCCACT TCTCAGACAA GCCCTCCCCA GATTCTTCTA AACTGGGGGC TCCTTCGGAT 480
CCTCATACCC CAAAGTCAGA TCCCTAATCC CGAGGTTCTC ATCTCGGGCA CCAGCTCCCC 540
CCAAATCTCC ACCTTAGTGG TTTTGACGCC CTTCTCAGGG ACGGGCTCCA 590