EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-30282

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr8:87643760-87645140

Target genes

Number: 31
Name	Ensembl ID

Cacna1a	ENSMUSG00000034656
Ier2	ENSMUSG00000053560
Nacc1	ENSMUSG00000001910
Nfix	ENSMUSG00000001911
Gadd45gip1	ENSMUSG00000033751
Dand5	ENSMUSG00000053226
Rad23a	ENSMUSG00000003813
Calr	ENSMUSG00000003814
Farsa	ENSMUSG00000003808
Syce2	ENSMUSG00000003824
Gcdh	ENSMUSG00000003809
Klf1	ENSMUSG00000054191
Dnase2a	ENSMUSG00000003812
Mast1	ENSMUSG00000053693
Rtbdn	ENSMUSG00000048617
Prdx2	ENSMUSG00000005161
Rnaseh2a	ENSMUSG00000052926
Junb	ENSMUSG00000052837
Hook2	ENSMUSG00000052566
Asna1	ENSMUSG00000052456
2310036O22Rik	ENSMUSG00000041203
Tnpo2	ENSMUSG00000031691
Fbxw9	ENSMUSG00000008167
A230103J11Rik	ENSMUSG00000087026
Dhps	ENSMUSG00000060038
BC056474	ENSMUSG00000059355
Wdr83	ENSMUSG00000005150
Man2b1	ENSMUSG00000005142
Zfp791	ENSMUSG00000074194
Gm6531	ENSMUSG00000062687
Vps35	ENSMUSG00000031696

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOXF2	MA0030.1	chr8:87645103-87645117	AATGTTTACCTTTA	-	6.27
Nr5a2	MA0505.1	chr8:87644404-87644419	TTGTTCAAGGCCAGC	+	6.04
TFAP2B(var.2)	MA0812.1	chr8:87644723-87644734	TGCCTCAGGCT	-	6.14
TFAP2C(var.2)	MA0814.1	chr8:87644723-87644734	TGCCTCAGGCT	-	6.32

Enhancer Sequence

AGCCGCTTCT GAATAAGGGA ATGCAAATAT TCTCGGTTTC CAGATGGTGC GACATCTAGC 60
GTTATCCGGA GTAGTTTATA GTGTTTACAA GAGGAAGAAA GCCTTCCAGG GATGGAGGCT 120
ATTCCTGAAA TCATGGTTGT TTGCCATAGA CACTTTGTTT TTTAAGGCAG GGTTTCTCTG 180
CGTAGCCCTG ACTGTCCTGA AACTCGCTCT GTAGACCAGG CTAGACTCTA ACAGAAATTT 240
ATCTGTCTGC CCGTGCCTCC TGAGTGCAGG ATTAAAGGCC ATTGCCACTG CTTGGCCTGC 300
AGACACTTTT TTTTTTTTAA AGATTTATTT ATTTATTTAT TTATTTATTT ATTTATTTAT 360
TTATTTATTT ATTTATTTAT TTATTATGTG TAAGTACACT GTAGCTATCT TCAGACACTT 420
CAGAAGAGGG CGTCAGATCT CATTACCGGT GGTTGTGAGC CACCATGTGG TTGCTGGGAT 480
TTGAACTCAG GACCTTTGGA AGAGCAGTTG GTGCTCTTAA CCACTGAACC ATCTCTCCAG 540
CCCGACACTC TTTTAAAGGA ACCCTGCAGC CGGGAACGGC AATGCACTTT GCAATCCCAG 600
AGATTGGGAG CTGAAGCATG ATCAGGAATT CAGGCATCTG TAATTTGTTC AAGGCCAGCC 660
TGGGCTGCAT GAGACCCTGT ATAAAAATAA AGTGAACTTG AGGGTATAGT TCAGTGCTTA 720
ACCATTGTGA AACCATCCAT CCCCACAAAC AAACAAAAAA GTCTCCCTGG TACATATGGT 780
CAGGATTTGC TTCATAGTTT CCCCATCTTC ACAGATCCAG GTTTTAAAAA GGAACCCCCC 840
TACTCTGGTC TGACATTTGA ATTGGACAAC CTCAGAATGA GTGTAGCTTT CTTTCTCTGT 900
TTCTCTGCTA TGTAACAAGG GCTGGTACTG TAGCTCAGGC TACCCTAGAA CCCAGGACCC 960
TTCTGCCTCA GGCTCCCTAG TATTGTAATT ACAGATATTT GTTGTTTTTA ACAAAATCTC 1020
AATTGTTTGA TTTTACCAAT GAAGACACAG AAGCCAGATG CCTGGATGAA AGCCTGCTGG 1080
CTCAGGGAGG CAGAGAAAGC ACCCAGCTGA TTTTCATCCT CAGCTGAAAT CTCAGCTGAA 1140
ACCTCTCTCA CACCTTCAAA ACATCCCAAA GGTCTCAGAA ACCTTCAAAC TCCAGTCCCC 1200
TTCTGCTGTC TTCAGATCAA GATGTTGAAT AGAATTCTTG GATCCTCCAG TACCATGTCT 1260
GCCTGCACCC CATGCTGTGA ATACCATGTT TCCCACCATG ATGATAGTGG ACTGAACCTC 1320
TAAGACTTTA GCCAACCCCA ATTAATGTTT ACCTTTAAAA GAGTTGCCTT GGGGCTGGAG 1380