EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-30250

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr8:87497440-87497890

Target genes

Number: 24
Name	Ensembl ID

Cacna1a	ENSMUSG00000034656
Gm16183	ENSMUSG00000086067
Trmt1	ENSMUSG00000001909
Nacc1	ENSMUSG00000001910
Lyl1	ENSMUSG00000034041
G430095P16Rik	ENSMUSG00000074203
Gadd45gip1	ENSMUSG00000033751
Rad23a	ENSMUSG00000003813
Klf1	ENSMUSG00000054191
Dnase2a	ENSMUSG00000003812
Rtbdn	ENSMUSG00000048617
Prdx2	ENSMUSG00000005161
Rnaseh2a	ENSMUSG00000052926
Junb	ENSMUSG00000052837
Hook2	ENSMUSG00000052566
Asna1	ENSMUSG00000052456
2310036O22Rik	ENSMUSG00000041203
Tnpo2	ENSMUSG00000031691
Fbxw9	ENSMUSG00000008167
A230103J11Rik	ENSMUSG00000087026
Dhps	ENSMUSG00000060038
Wdr83	ENSMUSG00000005150
Man2b1	ENSMUSG00000005142
Vps35	ENSMUSG00000031696

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr5a2	MA0505.1	chr8:87497643-87497658	GGGTTCAAGGCCAGC	+	7.23
SOX10	MA0442.2	chr8:87497692-87497703	AAAACAAAGGA	+	6.32
Sox3	MA0514.1	chr8:87497692-87497702	AAAACAAAGG	-	6.02

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

mSE_01560	chr8:87452484-87522298	Th_Cells
mSE_06106	chr8:87488846-87504475	E14.5_Liver
mSE_08696	chr8:87496899-87506448	Liver

Enhancer Sequence

GCCAACCTGA TCGATACAGA GAAAATTGTA GGCCAGCCAG AGACCCATTC TTTAAAAAAG 60
CAAAGAAAAA AGGGCTGAAG GACAAGTAGG TGTACAGTGC TTGTCTGTCT TGCACAAGAT 120
TAAGGCTTAT ATTTCAGTAC TGCAGCATTT GGAGCTGGGC ATGGTGATAC TTATCAGTTA 180
GGAGGCTGAA ATAGGATCAC CATGGGTTCA AGGCCAGCCT GGGCTACATA GTTAGATTTC 240
CTCAACAACA ACAAAACAAA GGACAGAAGA AACAAAATGA TGGGACAGAA AAATGTCACT 300
TCAAACTGGT CTGAACGGAG TCTTCTGTCC ACATGCAACC TGTTTGGCTT TTAGCTCCCA 360
GCCTTTTCTT GTGCTGCCTG TGCTCTCAAA TGAACTGCTT GCCACTGCCC TTGGTGGTGG 420
AGCTGAGCCT CACGTGTTCA TCCTTGTGTG 450