EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-30179

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr8:87080700-87082910

Target genes

Number: 32
Name	Ensembl ID

Prkaca	ENSMUSG00000005469
Zswim4	ENSMUSG00000035671
D8Ertd738e	ENSMUSG00000019362
Mri1	ENSMUSG00000004996
Ccdc130	ENSMUSG00000004994
SNORA9	ENSMUSG00000064392
Cacna1a	ENSMUSG00000034656
Gm16183	ENSMUSG00000086067
Ier2	ENSMUSG00000053560
Gm2529	ENSMUSG00000073822
Trmt1	ENSMUSG00000001909
Nacc1	ENSMUSG00000001910
Lyl1	ENSMUSG00000034041
G430095P16Rik	ENSMUSG00000074203
Nfix	ENSMUSG00000001911
Gadd45gip1	ENSMUSG00000033751
Dand5	ENSMUSG00000053226
Rad23a	ENSMUSG00000003813
Calr	ENSMUSG00000003814
1700122E12Rik	ENSMUSG00000087685
Farsa	ENSMUSG00000003808
Syce2	ENSMUSG00000003824
Gcdh	ENSMUSG00000003809
Klf1	ENSMUSG00000054191
Dnase2a	ENSMUSG00000003812
Mast1	ENSMUSG00000053693
Rtbdn	ENSMUSG00000048617
Prdx2	ENSMUSG00000005161
Hook2	ENSMUSG00000052566
Asna1	ENSMUSG00000052456
2310036O22Rik	ENSMUSG00000041203
Tnpo2	ENSMUSG00000031691

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EOMES	MA0800.1	chr8:87082594-87082607	AAGGTGTGAAACT	+	6.44
TBR1	MA0802.1	chr8:87082595-87082605	AGGTGTGAAA	+	6.02
TBX21	MA0690.1	chr8:87082594-87082604	AAGGTGTGAA	+	6.02
TBX2	MA0688.1	chr8:87082594-87082605	AAGGTGTGAAA	+	6.62
mix-a	MA0621.1	chr8:87081261-87081272	ACTAATTAATT	-	6.62

Enhancer Sequence

CATAGCCGTG TAAGTATCCC CAAGCCTTAA GCGCCACCCA GGCAAGGATG TGGGGAGAGT 60
TAGCGTGGCC CCTAACTGCT GAGCCTGGGA GAGGTCGGCA CCTTTGCTTT CTCGTCCCCT 120
TTCACTCTGT ATTTAATGAA CACCTACAAT GAGCCTGGTC CTGTTGTAAC TGCTGGGAAG 180
GCAGCATCCA TGTCAGGGAG GGGCACTGTT GTGTAGCTGT TCAAGTCAGA GAAATAATAA 240
ATAATAAGCA AGACAAGTAA GTAAATTATA CCCTGTGGAA CCTCCAGGAA GCATCTGGGA 300
AGGGGCAGGG AGCTGAGGAG TGCAGAACTT GAGCCAGGCT TCACTGCAGC CCCACAGATG 360
TGACTTTATA GCCAGGGGTG CTGGCACATG CCTCATTCGA GATAGAGACA GGCAGATCTG 420
TGTGAGTTCA AGAACAGCCA GGTCCAGACT AGGCATAGTG AGATGCTGTC TCCAGAAAAC 480
AAACTTGTTA GGAAAGGTGT CTTCATTAGG GTTTTACTGC TGTGAGCAGA CACCATGAAC 540
AAGACAACTC TTATAAGGAC AACTAATTAA TTGGGGCTGG CTTACAGGTT CAGAGGTTCA 600
GTCCATTATC ATCAAGACAG GAACATGGCA GCATCCAGGC AGGCATGGTA CAGGAGGATG 660
GAGAGTTCTA CATCTTCATC AAAGACTGCT AGCAGAATAC TGACTTCCAG GCAGCTAGGA 720
TGAAGTTCTT AAAGTCCACA CCCACAGTGA CATAGCTACT CCAACAAGGC CTCACTTCCA 780
AATAGTGCCT TCTGGGCCAA GCATATTCAA AGCATGACAA AAGGCCTTGC CTAAAAAGAA 840
ACAAATTTTG AAGGAAATGA GAGAGGAGGC AAGGCTCGGA GGCAGGGGTG TTCCAGGAAT 900
GGGAAAGAGA CTAGCATGGC TGAAAAAGAG TGAGTGAGAG ACAGACTTAG AGGAAAATGT 960
AGGGAAGGGA ACAGAATAGG CAAGGCTAGA CCACAGGAAA AACTTGTGCT TGGGCTCCAA 1020
GAGTTGTTGT TCCCCAGTTA AGTTACAGCC AGAGAGAGTT CTTGAGCAGT GGAGGTTTAA 1080
GACCAGACTC AGATACCCTC TAATTATTCT TGTGGTAATA GAATGTAGTG GGGTGGGGAT 1140
CTTATGTGTA CCTGAAGGTC AGACTCAAGA ACCTGGGCTG GCTCAGGCAA AAGAGATGAC 1200
TGGGCAAGGT CATGGGTGCA GCTGCGATTC AAGACAGATT CTAAGGGAAG AGCAGACACT 1260
TCACTGGTGA ATCAGAGGCA GTGACTTGGA AAGTGTCTTA GTTAAAGGGA GGCTCAGGAA 1320
CACCCACATT CAGAGCCACA TCTCTGCTGA TGGCTAGTGG GAGTGGCTAT GGCAGGGCAA 1380
AGGCATGCAC AGCCAACTGC TTTCCTCCAG GGGTGCCCAT GACTCGAACC TGCACACCCC 1440
AGCTGCTCAC CACCCAGAAG AAAAGGATCG GAGATGGCTT CATGTGCTGC CATTTAAATT 1500
GTGTGTTTGT TCGTTTGTTG GATTGTTCTT TCATTCATTC TGGCACTGGG GATGGAACCC 1560
AGGGATTCAT TTGTGGTAGG CAGGCAAGGC CTCCGTCACT GAGCCACACA ACCAGCCCCT 1620
CACTGGTAGA ATCTTGAACT CTGGTAGTGT GACAATGGGA GCCTGTAGTG AGGCAGGGTA 1680
TTTTAATGAA AACCCAAACT GCACAGCTCA AGGTGCTGGA GAAGCCGAGA GAAAGAAGGT 1740
GCCAAGGGCG GCCCAATATC CCGTTCAGAG GCAGTTCTTC ATAACCTAAC TTCCTCCAAG 1800
TAGACCCTGC CCCCTAAAGT GTGCCACTTC GCGTTAGCCC ATGTGTCTAT AAGTCCATCA 1860
ATGGACCAAT CACACACCTG TCTTCTTATC AGTGAAGGTG TGAAACTGGC CTAGAGAGAG 1920
TCCAAGAGAA AGGGCCGGTA AAATGGCTCG GGAGAGGGGT AAAGAATCTT GGCACCAAGT 1980
CCTACAACCT GAATTCAGAC TCTTAATAGT GGAAGAGAAC CGATTGCAGA TAGTTGCTCT 2040
GACATTCACA CACCTGCGGT GGCCATATGC AAACACATAC ATCAAAGTTA TAAAAGTTGA 2100
AAGAATCCAC TGGAGTTGCG GGGGGGGGGG GTTGTTGTCA ACACCTTCGT TATCCGACCA 2160
CCTTCACACA CAGCTGCAGC GCACGGCAAG CAGCCTCCCC TCCTTGCCTT 2210