EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-29928

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr8:73289210-73290400

Target genes

Number: 20
Name	Ensembl ID

Homer3	ENSMUSG00000003573
Cope	ENSMUSG00000055681
Klhl26	ENSMUSG00000055707
Tmem59l	ENSMUSG00000035964
2810428I15Rik	ENSMUSG00000058833
Uba52	ENSMUSG00000090137
Fkbp8	ENSMUSG00000019428
Ell	ENSMUSG00000070002
Pgpep1	ENSMUSG00000056204
Jund	ENSMUSG00000071076
Gm11175	ENSMUSG00000080058
Pde4c	ENSMUSG00000031842
Rab3a	ENSMUSG00000031840
Ifi30	ENSMUSG00000031838
Pik3r2	ENSMUSG00000031834
Mast3	ENSMUSG00000031833
Il12rb1	ENSMUSG00000000791
Kcnn1	ENSMUSG00000002908
Ccdc124	ENSMUSG00000007721
Rpl18a	ENSMUSG00000045128

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ZNF263	MA0528.1	chr8:73289733-73289754	TCTCTCCGTCCCTCCTCCCTC	-	6.31
ZNF263	MA0528.1	chr8:73289742-73289763	CCCTCCTCCCTCCCCACCTCT	-	6.93

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

mSE_00411	chr8:73265449-73292567	pro-B_Cells
mSE_07919	chr8:73287077-73292304	Intestine
mSE_12523	chr8:73288243-73293611	Spleen

Enhancer Sequence

CTGTGTAGCC CTGGCTGTCC TGGTACTCAC TTTGTAGACC AGGCTAGCCT CGAACTCAGA 60
AATCTGCCTG CCTCTGCCTC CCAATTGCTG GGACTAAAGG CGTGCGCCAC CACCGCCAGG 120
CTTTTTTTTC CCCCTCTGAG GTTTTCGAGA CTCTAGATCC TGTTCCGCAA TCACAGTTTA 180
TCTACAAAAC GGAACCTGAC AGGCTCTCAA ACAGTAGGTG CTCAGCGAAT GCACAATCTT 240
TAACTATATT CAGGAAGTGC TAAGACAACA CTAGCACCCG GGAGGCAGAG GAAGAGTTCC 300
AGGCCAGCCT GCTGTACATA GTGAGTTCCA GGACAGTCAG CCCTACACTG AGACTCTGTC 360
CCCTCCATTA ACAAAACAGA AAACCAAACC AAATCAAAAT AAAGTAAAAT AAAGTAAAAG 420
AAAAAAAAAA GATATGCATA TTTCTAGTTG CTGCTCTCTC GCTCAGCTTT GTCTGTTCAG 480
AGATGCACAC TCTGAAGCCA AATACATGCT CTCTCGCTTG ATCTCTCTCC GTCCCTCCTC 540
CCTCCCCACC TCTGTAATTT TGCGCATCAC AGCGATGCCT TTCACCCACG AAGACTCTAT 600
TCTTCCTCTC CAGGGACCCA GGGAAACTTC ACCCAGTCTG ATGCCCGACT AGACACAGAA 660
GGTGCCTGAT GCGTGCAGAG ACTTCCGGTC CCCGGGGAGG GCGGGCCGAG TCTGAGCAAG 720
GATCTAGGCG TGCGGGGCAT GTGTTTGCTC CAGGTCAGAA GCACGCTAGC CCCCTCTCTT 780
CTTCGGCTGG AACGCACACC GTAAGCGACA AGAATTGTGT GAGGGTGGAG ACCAGACAGT 840
GATTCAACAG GTCTGGAGCA GAACACCCCC CCTCACACAC ATACACACAC CCCGTGCGCG 900
TGCCCATCCC TCAGCTCTTC ACTCAGACAT ATCCGGTAGG TGGTTGATAA ATGCTCAGGC 960
AAGGCGGGCA GGGGATAGCT GCATTTTTCA GACCTGAGAT GGGGAAGAGA AAGGACGTGG 1020
ACACGGTACT CAGAGTTCAG GGACTGGATT AGGGGTGGCG GCCCTGGGCG TGACAGCTTT 1080
CCCTGAAGAC ATTGGAGTTC CCCAAAACGA GTTCACGGAA TAAGTGCAGA GAAGTCCCTA 1140
AGCTGACAGA CTGGCGGGCA TCTGACCCTG GGCCCCTTCC TGCGTTGCGG 1190