EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-27803

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr7:51884250-51884620

Target genes

Number: 22
Name	Ensembl ID

Shank1	ENSMUSG00000038738
Syt3	ENSMUSG00000030731
1700008O03Rik	ENSMUSG00000008028
Lrrc4b	ENSMUSG00000047085
Aspdh	ENSMUSG00000038704
2310044H10Rik	ENSMUSG00000008140
Fam71e1	ENSMUSG00000051113
Pold1	ENSMUSG00000038644
Nr1h2	ENSMUSG00000060601
Napsa	ENSMUSG00000002204
Gm15396	ENSMUSG00000087560
Kcnc3	ENSMUSG00000062785
Myh14	ENSMUSG00000030739
Vrk3	ENSMUSG00000002205
Nup62	ENSMUSG00000043858
Atf5	ENSMUSG00000038539
Akt1s1	ENSMUSG00000011096
Pnkp	ENSMUSG00000002963
Ptov1	ENSMUSG00000038502
Cpt1c	ENSMUSG00000007783
Prmt1	ENSMUSG00000052429
Slc17a7	ENSMUSG00000070570

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1	MA0073.1	chr7:51884490-51884510	CCCCCACACACACACACTCC	+	6.34
RREB1	MA0073.1	chr7:51884486-51884506	CCCCCCCCCACACACACACA	+	6.38
ZNF263	MA0528.1	chr7:51884322-51884343	CCCTCCACCCTTCTCTCCTCT	-	6.42
ZNF740	MA0753.2	chr7:51884484-51884497	CCCCCCCCCCCAC	+	6.92

Enhancer Sequence

CTCCGCTCCT AGGGACAAAA GAGACTCAGG ACCCTTGCTT GCCTGCCATG TCCCCAGCAT 60
CTGCCCTTCC CTCCCTCCAC CCTTCTCTCC TCTCCATCCT GGGGTCTGGA CCCAGCCCAC 120
CTTAGGGACT CACGAATGGT ATTAAGCACC AGCACATGGA GGGATATGGG CTGCTCTTTT 180
GAACAACACT TCAGGACACC CCCAGGGGGC AGCGCACCCT CGCCATCACC CCTCCCCCCC 240
CCCCCACACA CACACACTCC TGGCTCACTG GACCAAGATC CCAGCAGGAG CCCATCTACC 300
GTATCTTGCT TTGGTGTGCC CATGGTCCCC AGAGGCTTCC CCCGCTGACC CAGGATGCGG 360
TGCTACCCAG 370