EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-27758

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr7:51776420-51777040

Target genes

Number: 15
Name	Ensembl ID

1700028J19Rik	ENSMUSG00000038782
Clec11a	ENSMUSG00000004473
Shank1	ENSMUSG00000038738
Lrrc4b	ENSMUSG00000047085
Aspdh	ENSMUSG00000038704
2310044H10Rik	ENSMUSG00000008140
Fam71e1	ENSMUSG00000051113
Pold1	ENSMUSG00000038644
Nr1h2	ENSMUSG00000060601
Napsa	ENSMUSG00000002204
Gm15396	ENSMUSG00000087560
Kcnc3	ENSMUSG00000062785
Myh14	ENSMUSG00000030739
Vrk3	ENSMUSG00000002205
Ptov1	ENSMUSG00000038502

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1	MA0073.1	chr7:51776837-51776857	CACCCCCCCACCCCCACCCC	+	6.82
RREB1	MA0073.1	chr7:51776829-51776849	ACCCCACCCACCCCCCCACC	+	8.33
SP1	MA0079.4	chr7:51776553-51776568	GTCGCCACGCCCACC	+	6
SP3	MA0746.2	chr7:51776555-51776568	CGCCACGCCCACC	+	7.52
SP4	MA0685.1	chr7:51776553-51776570	GTCGCCACGCCCACCCT	+	6.05
SP8	MA0747.1	chr7:51776556-51776568	GCCACGCCCACC	+	6.62

Enhancer Sequence

CTTGTTTATT TTGAGGCAGG TGTAACCCAG GCTCACTTGG GGCTGGCACC AACCATCCTG 60
CCCCATCTTC ATTGCTGGGT GTAAAGCATG TAACAGCACA ACTTCTCTAC AATTCATAGT 120
TTCCAGCCCA CTGGTCGCCA CGCCCACCCT CCAGCCAGCC AGTTCCTTAC TCCCCAGGCC 180
AGGGCAACTT CATTTCTGCC ACTCCTATTT TCAAGCCCCA CACACTTTGA GCTGCCGAAC 240
CCCAGAGGCT GCAGGGTCCT TACTGCCTGG GCTCTGCACC CCTTCTTGAA CCCATACACC 300
CAAACCCTAT GAGCCAGGAG GCCTTGTCTA CCCAAGCCTT CAGCTCACAC AATCCTGGAA 360
GCCTCCTAAA CTTTTGCATG GGCACCCCAA ATTGCTAAAC ACCTGTAACA CCCCACCCAC 420
CCCCCCACCC CCACCCCCGT CTATATCTCC TATGCAAAGC CTGGAGACCT TGTCTCCCCC 480
TTTCCCATTA CTGAGTCTGG ACCCTCTCCT CTAAGAGATT ACCCCAACTC CACACCTGCA 540
TCCATCCCAG CTGCCTAGAA CCTCCCACTC CAGCCAGTTC CCCCGGCCCC GCCTGCGCCC 600
CCGCCAGCGC CCCCGCTAGC 620