EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-27651

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr7:31409660-31411060

Target genes

Number: 30
Name	Ensembl ID

Capns1	ENSMUSG00000001794
Polr2i	ENSMUSG00000019738
Tbcb	ENSMUSG00000006095
Clip3	ENSMUSG00000013921
Alkbh6	ENSMUSG00000042831
AC149067.1	ENSMUSG00000093571
AI428936	ENSMUSG00000019737
U2	ENSMUSG00000064982
Lrfn3	ENSMUSG00000036957
Tyrobp	ENSMUSG00000030579
Nfkbid	ENSMUSG00000036931
Aplp1	ENSMUSG00000006651
Kirrel2	ENSMUSG00000036915
Arhgap33	ENSMUSG00000036882
Hspb6	ENSMUSG00000036854
BC053749	ENSMUSG00000036864
Lin37	ENSMUSG00000036845
Psenen	ENSMUSG00000036835
U2af1l4	ENSMUSG00000078765
Gm17104	ENSMUSG00000091271
Tmem149	ENSMUSG00000036826
Wbp7	ENSMUSG00000006307
Zbtb32	ENSMUSG00000006310
Upk1a	ENSMUSG00000006313
Rbm42	ENSMUSG00000036733
Gm17478	ENSMUSG00000087359
Haus5	ENSMUSG00000078762
4930479M11Rik	ENSMUSG00000049761
Atp4a	ENSMUSG00000005553
Tmem147	ENSMUSG00000006315

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1	MA0073.1	chr7:31410386-31410406	ACGCAAACCGCCCCCCCCCC	+	6
ZNF143	MA0088.2	chr7:31410131-31410147	AAATGCATTGTGGGAT	-	6.39
ZNF740	MA0753.2	chr7:31410393-31410406	CCGCCCCCCCCCC	+	6.64

Enhancer Sequence

CAACCATTCT GGAGGTGCTG GGTGTGGGGA TGTCAGGCCA GAGCAGAATA ACAGGCTGAA 60
TGTGAATAAA CCATTATCTC CCCCTTCTTC ACAAACACAG AAAGATGAAG GGCAGGGAAA 120
ACCCATATAT CTGAGTACAG AAGCCACAGT AGGGTTGGAC AGAGGTCTCC TTGGCAAAAC 180
CAATCTTCAT CCTTAAATTC CAGTTAACGC TCACTGTGTG CACAGCACAT ACTATGTGTA 240
CTCTATACAT ACCTACCCCA TGGCCACTCT AAAAGATATT GCTACCTCTG TTGTCTACAC 300
AAGGGACAGG GTGTCTAAAT GACTTTCCAA GGTCACACAG CACCCAGTGA TAATGCTTCA 360
TCCATCACCA GCAAAAACAC TGCAAGGATT TTCTGGTGTC ACCGGCTAGT TTTCTGGCGT 420
CACACACTCA TCTGAGGTCC AATGAACTCA AACTTTGCTC AGAATATGCC TAAATGCATT 480
GTGGGATTGC CTAAGATGTG TCCCCCCCCA CCCCGCTCCA AAAAAAAAAA AAAAAAAAAG 540
CTCAAAGGAC TTAACAAGTA AAGTACAACT GGAGGTAACC ATGACTGAAG ATTTGTGACT 600
CTTGTAACTG GCATGTGTCA GGTATCTGTG ATTTTGCCTG CTGACAATGG CCCAGGCTAC 660
CAAATCTATT GACGTTGCTG CCTCCATTCC TAATGGAAGT AAATACTGGA ATTCGATTAG 720
AACCCCACGC AAACCGCCCC CCCCCCAATC ATTCAAATAC TTTAGCTCCT TGAGTTTTAT 780
CGACTTCTCT CAGCTTTGAT ATGTCTGAAG AGATGACATA GTCAATATCA ACAGACCTGA 840
GAGAAACTGT CTCTAGAGCA TCTGGGGGAC CTTGACACCA CAGAGGTGCC AGTGTCAACT 900
GAAGTAGTCC AAACAAGTGG GGTATTTGGG CAGGTTCATT GAAGGAGGCA AGGTGGGCAC 960
GGGGGATTTA AAAGACTCAG TGTCGGAAGT AATTTTGGAC AATATCTCGA GTTTTGAGAG 1020
TTGATCAAAG ATGACGCTGA GGGGAAAGAC ACGAGTCAAG GCGACAGGCT TCGGCCTTGG 1080
AACGCGGGTG GCCACGCCTG TGAACTCGCA ACTAAAAGCT CCACAGTCCA ATTTACTGGG 1140
TCTAAATCCG AATTGCCTTA TAGCCACGGG TAAGGCGCTT CACACTCCAG CCCCAACGCT 1200
ATCAAAGGGG ACTTGTAGGG CTGAAGGATG GAGTAATAGG GACTGCTTAG AAAGCGACCT 1260
AGCCATCATG AAGAAAGGCG GCTATAATGG TTAGCTCCAG GACACCGGAC CCGTGGCCGC 1320
CGGAAGTTTC TGCTTGGCGT CAGGGAAGCC CCGGGGCGCT TCTCTGCAAC GGACAAGGTT 1380
CCCCCAGGAT CCCGACCCTT 1400