EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-26118

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr6:87844160-87845680

Target genes

Number: 12
Name	Ensembl ID

Aplf	ENSMUSG00000030051
Ccdc48	ENSMUSG00000068263
Gp9	ENSMUSG00000030054
Rab43	ENSMUSG00000030055
Isy1	ENSMUSG00000030056
Cnbp	ENSMUSG00000030057
Copg	ENSMUSG00000030058
8430410A17Rik	ENSMUSG00000030060
Gm5577	ENSMUSG00000084950
H1fx	ENSMUSG00000044927
Rab7	ENSMUSG00000079477
Rpn1	ENSMUSG00000030062

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

GATA2	MA0036.3	chr6:87844964-87844975	AAAGATAAGAA	-	6.62
RARA(var.2)	MA0730.1	chr6:87844439-87844456	TGTCCTCTGTCTGACCT	-	6
Rarb(var.2)	MA0858.1	chr6:87844439-87844456	TGTCCTCTGTCTGACCT	-	6.11

Enhancer Sequence

TGTGTCAGGT CTCCATATAT CCCCTTCCTT GCTGGGCACA GGCCCCGAGC CAGAGATCTT 60
CAGATAGGCC ATGATGTAGG GCTGTCACAG GTGTTGCTTT AAAGGAGGGC TGTTTTCAGT 120
TCCATCTCAG TGCTGGTGGG GCACTGCTGG GCCAGCTGGC TCCAGAGGAG GACTCGGGGT 180
GGGGCCCAGG ACCTATAAAG CTCAGGGTGC TTGCTCATGG GGCGCACTGG AACTCACAGC 240
TGGACTCACT GCAACTGCCC TGAGCAGGCA GAAAGCCCCT GTCCTCTGTC TGACCTTCCT 300
CACCAGGCCT CATTTCCCTT CTGAAACACA AAGGGCCCTC TTGCTGTAGG TGGTACCGGT 360
GGGATCTGCA CAGGCTACTC AGTAGTGTGA CACACACTAC TGAGTGCATT CTGTGTGTGT 420
TACTAAGGAG AAGCCAACAG CTTTCAGTTG TTTCTGCTCT AGCGAGCAGA GCAGTGCCTG 480
TCTCCCTGCC GGATGCTGGC GTTGGGATGA GAGTAGAGAA TATGCACCTG GGGCTTGAAA 540
AGCTAAAGAG CTGCTGCAAA ACAGTTGAGA GGTCAACGAG GGTCTGCATA GGGTTTCATG 600
AGGAGGAGAG AGGGATGAAT ATCTAACTCA GGACCCGCCC AGAGGCAACG AAGTAAGAGT 660
TGTAATGATT GGACTGTTCT TCTAGAGGTC TCCACAGTGG TGATGATACT AAACTGGTAG 720
GAAGATAGGC TCAATTATGG ATGCATTTAC TCACTGACTA GAGACTAATG TACTCCTATG 780
ATAGTCTCAT ATTTCCAGAA AATGAAAGAT AAGAAGTAGA GGCTTTAAAA GATACATCAT 840
CCAACTATTT TAAGAGAAAT GTTAGTTCCA AAATAAATAG ATAGGTAGAT AGATAGCAAG 900
AGAAAAGCTA AGCAATATTC TAGAATACAG TCCCATTCAA GACTATACTA GAACATAGAC 960
TTTAGCTGTG AGCTTCGGGC AGGCAGGTGG AGGGAATAGT GTGGTCCCTG ATAGACACAG 1020
CAGTGGTCAA CTCTTTAGCA CTGATCCAGA GAGGAATACA TTTGCTCTTT GAGAGAGGCT 1080
TTAGCCCCCT AGCTTGGTGC TGAGGTATGT CCTACTGGGT CCTATGAACA TAGAAAGAGA 1140
GGTGGCTAGG TGGGCTGCAG ATGTGGACAG CCCGTGACTT ACCCCTTTTG CTGTCGGGTA 1200
GCTGCTACTA AAAGTCACTT GAGGTCCTTT GCCGCTGTTC CCAGGGAGTT CAGAGAATCA 1260
GACAGGCACA GCATCCACTC AGTGAGGGCC TAGCACAGGG CAGGTGCTTA GTCTATGACG 1320
GCCATTGACA CCCACAGGGC CCTTGCTGAC AAGGTTCAGG ACGAGGCAGT TCTGCTGCTC 1380
TCTGCTAAGC AGAAGGCTTG TGTGTGACTA GCCCGAGAGC TTGTTCACCT TTGATCCCAT 1440
GCCATTCCCT GGGAACCCCA GGTATTCCAC TGACATTCCC TTGCCTGGCA TCTAGGCAGC 1500
CTGATGACAG TGTCTTCCTC 1520