EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-25286

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr5:144230290-144233630

Target genes

Number: 12
Name	Ensembl ID

Rbak	ENSMUSG00000061898
Zfp12	ENSMUSG00000029587
E130309D02Rik	ENSMUSG00000039244
RP23	ENSMUSG00000093720
Kdelr2	ENSMUSG00000079111
Daglb	ENSMUSG00000039206
Rac1	ENSMUSG00000001847
2810453I06Rik	ENSMUSG00000048910
Cyth3	ENSMUSG00000018001
Usp42	ENSMUSG00000051306
D130017N08Rik	ENSMUSG00000087189
Pms2	ENSMUSG00000079109

TF binding sites/motifs

Number: 16

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

NR2C2	MA0504.1	chr5:144233365-144233380	GTAGGTCAGAGGTCA	+	6.6
Nr2f6	MA0677.1	chr5:144233366-144233380	TAGGTCAGAGGTCA	+	6.55
Nr5a2	MA0505.1	chr5:144231199-144231214	GAGTTCAAGGCCAGT	+	7.4
PAX1	MA0779.1	chr5:144233412-144233429	TTCAGTCATGCAGGACC	-	6.12
PAX9	MA0781.1	chr5:144233412-144233429	TTCAGTCATGCAGGACC	-	6.09
RREB1	MA0073.1	chr5:144232313-144232333	ACACAAACCACACACCACAC	+	6.25
RREB1	MA0073.1	chr5:144232244-144232264	CCCCACACCACACACACCAC	+	6.52
RXRB	MA0855.1	chr5:144233366-144233380	TAGGTCAGAGGTCA	+	6
RXRG	MA0856.1	chr5:144233366-144233380	TAGGTCAGAGGTCA	+	6.18
Rxra	MA0512.2	chr5:144233366-144233380	TAGGTCAGAGGTCA	+	6.03
Stat6	MA0520.1	chr5:144231525-144231540	ACTTCTCAGGAAGAA	-	6.55
ZNF263	MA0528.1	chr5:144232862-144232883	CTCTCCCCCCTCTCTTCCCCT	-	6.22
ZNF263	MA0528.1	chr5:144232867-144232888	CCCCCTCTCTTCCCCTCCTCC	-	8.06
ZNF740	MA0753.2	chr5:144233207-144233220	CCCCCCCCCCCCC	+	6.03
ZNF740	MA0753.2	chr5:144233208-144233221	CCCCCCCCCCCCC	+	6.03
ZNF740	MA0753.2	chr5:144233209-144233222	CCCCCCCCCCCCC	+	6.03

Enhancer Sequence

ATTACAGGCA TGCACCACCA GACCGAGTAC GGGGCTTCAG TGAGAAATAA GGGAACAACC 60
CAGATCAGTG GAAAAAATAG GCAGAAAGCC TGAACAATAA CAGAATACAT TTTTTAATTT 120
AGCCTCAGCC ACACATAAAG ATATGAATAT AAGCATACTG TCTCATTACG AAGTGGGAAT 180
GAATGAACAG CTCTGTCTTT GCATGGGAAT CAGCCAAGCC TTTGGGTCGG CCAGTGTGAT 240
AACACACACA TAGCAATCAG GTCTCACCTA CAGTTGGCAT ATACACTCAG CAGTGCTTGT 300
AGTGTGGCTG TGGATAGACG AGCACAGGGA TTCTTCCTCG CAGTCACAGA TATATGTGAT 360
GTAGTTGAGA CAATGTCACT TTCGTTGTGG TCTTGTCTTT GCCTTTACAG GGTATTACTG 420
TGTAGCCCAG GCTGGCCAGA CTCGGTGATT TTCCTGTTTC AGCTTCTTGA GCCAGGGCTA 480
GGATCACAGG CATTTGTCTC CGTGTTTGAT TTCAGAAGGC TCCATGAAGC CCTCCTATTG 540
GGGGTAGATG GGGACGGTCC ACTTCCCAGG CAGTTCAAGG CGCTGTGACA GAGCCCTTTC 600
CATGGGGCCT GCCGTCTGCC GTGTCTGGGA GACCTTCTCT TTGATGCTTT TCTGCATGTC 660
CCACGTGCTG AGGGACCTAA GGAGGTCATT TTAGGAAATG TTTCTTTTTC TTTTGTTTTT 720
TGTTTTTTTT TTTCAAAGGA AGTCTTTCTT GAGGATAGCC CAGTGCAACA GTGTCTCTGA 780
AGGTCAGGGT CATCAAATTG AGATTGAGGG GGGAAAAAAA TATGGAAAGA AAAGTGTTTT 840
TCTACCCAGG CATGGTGGCG CATAACTTTA GTCCCAGCAC TCAGGAGGCA GAGGCAGGCA 900
GATCTCTGTG AGTTCAAGGC CAGTCTGGTC TGCAGAGTGA AACTTTGTCT TTAAAAAAAA 960
AAAAAATGTG TTTTTCTAAG ACCTGAACCT GATAAGGCCG TTAGTATTAC ATCGTGGGTT 1020
GGGGAGGGAC TCACAAGACC CCAGCTTTAG CTCAGGGGCT ACTGGCAGGC CGTGGTGCTG 1080
AGGGAGGGGA GTCATTTTTC TTCAGTGATG TAGCCACTGG TAAGTTGCCC GTGTTCCAGT 1140
GAAGAGCTCC CAGCCTGTGC TCAGGCAGTC ACCCTAATCA AACTCAGTGA GTCACCAAAA 1200
AGCAAAGCCA AGACAAAGAT TCGAGAGTAA GAGGGACTTC TCAGGAAGAA GGGGCTCCAG 1260
AGGGACCGGG AGGGGCAGGG AAGGGTGGTG ACCAAAATGT ACCACATATG TATACGAAAT 1320
TGTCAAGGAG TTTAAAACGG TGTTTTTCTA GGTAGATGGA GGGTCTTTCA ATGCCTCGTT 1380
TAATCTCTGG GGACTTGTTT AGACACACTC CATCTCTGTT TCTTTGTCCG TATTTAGTGA 1440
CTGTTGTGTT AGAGCTTTGT GTGAGGAGCC CCAATCACAG ATGCTGCTGA CTGTGTTAAA 1500
CTGTGTCCAT ATTTGGCATC TTTCCAGTGC AGCGGAGGTC TGGTTCCTGT TTTCTAGGGC 1560
CTCTGCCACT GTCACTTAGT AGCAGGCTTC CTTCGTTCCT CAGAGAGGGT GAGAGCTCTG 1620
TGCCAGCCAG CCAGATGGCT TAGCCAGGTT CTGCTCGCCA AGCCGGGTGA CCTGAGTGTG 1680
ATCCCACACA GTAGAAGGAA AAACTGACTC CTGCGGGTGT CCTCTGACCT CCTCTTGTGT 1740
GTCATGGCAC ACATGTGCTC ACACACAATA AATAAATGTA AATAAAAGTG TAAAAATCAA 1800
TTACCATATA AAGGCCAAGC AGGAGCCTTG GTAGTGCCAC GTGCACACAG CCTCACCACA 1860
AACACACACC ACACTCCACA CACAGACTTA CCATATACAC CACACACCAC ATACACACCG 1920
ACTCACCACA CACAAACCAC ACACTACATA TGCACCCCAC ACCACACACA CCACATACCA 1980
CACACCATAT ATATACCACA CCACATACAC ACAGACTCAC CACACACAAA CCACACACCA 2040
CACACCTCAT ACACAGACTT ACCACATACA CACCGCACAC CATATATACC ACACTTCACA 2100
CACACACACA GAATATACAC ACCATACATA CTACGTACAC ACCACACTCC ACACACACAG 2160
ACACACGCAC ACACACAAGT CTAGAGCTCT CTGACCCTCT GTTTGTAAAA TGAGATAATC 2220
TCTTGTCCAC AGTTTGCGAG GATTAAGGAA TGGTGGGTAT TAAAGTATTT AGTAGTACTG 2280
CGTGTTCAGT CAGGTGGACA ATGGGACACT TCTTCCTGGC TGAGAGAACC CGGGTGACGA 2340
CTACTTCTGC CTGGGACAGT CCTCTCCAGC TATACGGTTC CTCCAGTATA ATTACACCCA 2400
GTGTGCCTCT CTTGCTTCTT AGAAGTATTC CAGTTTGGGC TGTGATTATG TAGTCCTTCC 2460
TCCCTAGTTA GAGCCACAGT GAATCTACGC TAGGAGTGTG AAGCTTATGC CCTGCTTCCC 2520
AGCCTTCACT CTGTCTGTCT GTCTGTCTGT CTCCCCTCTC TTCTCACTCT CACTCTCCCC 2580
CCTCTCTTCC CCTCCTCCCC GCTCTTGTTT TTCCAAACCA GAGTTTCCTC TGTGTAGCCC 2640
TGGCTGTCCT GGAGCTCTCT CTGTAGACCA GGCTGGCCTC ACACTCAGAG CTCCGCCTGC 2700
CTCTGCCTCC CACACCGCCA CCCGGCTTTG TCACTTGCTT CCTATTTTGG GAAGTATAGT 2760
TGAGTAGGAG TTCAGTGGTG GGTGTGCAGC AAAACTCAGA GATGTTCAGT AGCTGTGTTT 2820
CTTAAGATTT ATTTTTAAAT TATGAGTATG TGTTTATGCG GCTGACTGTG GTATATGTGT 2880
GTGACTGCAG GTGCCTATGG AGGCCAGAGG GGTCAGACCC CCCCCCCCCC CCTGCAGCCG 2940
GAGTTATTTG TATGGGGCTG TGAGCTGCCT GGTGTAGATA TAGAGAGCCA ATTTCAGTGC 3000
ATGCTCTTAG CTGCTGAACA GTCTTTTCAG CCCCCTCCCT GTAGCTGGTG TGTGTGTGTG 3060
TGTGTGTGTG TGTGTGTAGG TCAGAGGTCA GTGTCGAGTC TTCTTCATTG TCAAGAGTCG 3120
TCTTCAGTCA TGCAGGACCT TAATTCTTGA GGGTGAACTG GATCCGAGTC AGCTCCAGTC 3180
TGCCTGTCTC CAATCCCACC AGCCCTCTGG TGAGACACAC ACCAATCCCA CCAGCCCTCT 3240
GGTGAGACAC ACACCAATCC CACCAGCCCT CTGGTGAGAC ACACACCAAT CCCACCAGCC 3300
CTCTGGTGAG ACACACACCA CCTTTCTGTC AGCTCTCATG 3340